PDB entry 1rdi

View 1rdi on RCSB PDB site
Description: mannose-binding protein, subtilisin digest fragment complex with alpha-methyl-l-fucopyranoside
Class: lectin
Keywords: c-type lectin, calcium-binding protein
Deposited on 1995-09-05, released 1996-03-08
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.196
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: mannose-binding protein-c
    Species: Rattus rattus [TaxId:10117]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1rdi1_
  • Chain '2':
    Compound: mannose-binding protein-c
    Species: Rattus rattus [TaxId:10117]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1rdi2_
  • Heterogens: MFU, CA, CL, HOH

PDB Chain Sequences:

  • Chain '1':
    Sequence, based on SEQRES records: (download) 
    >1rdi1 (1:)
kkyfmssvrrmplnrakalcselqgtvatprnaeenraiqnvakdvaflgitdqrtenvf
edltgnrvrytnwnegepnnvgsgencvvlltngkwndvpcsdsflvvcefsd

    Sequence, based on observed residues (ATOM records): (download) 
    >1rdi1 (1:)
kyfmssvrrmplnrakalcselqgtvatprnaeenraiqnvakdvaflgitdqrtenvfe
dltgnrvrytnwnegepnnvgsgencvvlltngkwndvpcsdsflvvcefs

  • Chain '2':
    Sequence, based on SEQRES records: (download) 
    >1rdi2 (2:)
kkyfmssvrrmplnrakalcselqgtvatprnaeenraiqnvakdvaflgitdqrtenvf
edltgnrvrytnwnegepnnvgsgencvvlltngkwndvpcsdsflvvcefsd

    Sequence, based on observed residues (ATOM records): (download) 
    >1rdi2 (2:)
kkyfmssvrrmplnrakalcselqgtvatprnaeenraiqnvakdvaflgitdqrtenvf
edltgnrvrytnwnegepnnvgsgencvvlltngkwndvpcsdsflvvcefs