PDB entry 1qsc

View 1qsc on RCSB PDB site
Description: crystal structure of the traf domain of traf2 in a complex with a peptide from the cd40 receptor
Class: signaling protein
Keywords: tnf signaling, traf, cd40 receptor, adapter protein, cell survival, coiled coil, signaling protein
Deposited on 1999-06-20, released 1999-08-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.215
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tnf receptor associated factor 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12933 (Start-190)
      • conflict (51)
      • conflict (54)
    Domains in SCOPe 2.06: d1qsca1, d1qsca2
  • Chain 'B':
    Compound: tnf receptor associated factor 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12933 (Start-190)
      • conflict (51)
      • conflict (54)
    Domains in SCOPe 2.06: d1qscb1, d1qscb2
  • Chain 'C':
    Compound: tnf receptor associated factor 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12933 (Start-190)
      • conflict (51)
      • conflict (54)
    Domains in SCOPe 2.06: d1qscc1, d1qscc2
  • Chain 'D':
    Compound: cd40 receptor
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1QSC (Start-5)
  • Chain 'E':
    Compound: cd40 receptor
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1QSC (Start-5)
  • Chain 'F':
    Compound: cd40 receptor
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 1QSC (Start-5)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1qscA (A:)
qdkiealsskvqqlersiglkdlamadleqkvlemeastydgvfiwkisdfarkrqeava
gripaifspafytsrygykmclriylngdgtgrgthlslffvvmkgpndallrwpfnqkv
tlmlldqnnrehvidafrpdvtsssfqrpvndmniasgcplfcpvskmeaknsyvrddai
fikaivdltgl

    Sequence, based on observed residues (ATOM records): (download) 
    >1qscA (A:)
qlersiglkdlamadleqkvlemeastydgvfiwkisdfarkrqeavagripaifspafy
tsrygykmclriylngdgtgrgthlslffvvmkgpndallrwpfnqkvtlmlldqnnreh
vidafrpdvtsssfqrpvndmniasgcplfcpvskmeaknsyvrddaifikaivdltgl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1qscB (B:)
qdkiealsskvqqlersiglkdlamadleqkvlemeastydgvfiwkisdfarkrqeava
gripaifspafytsrygykmclriylngdgtgrgthlslffvvmkgpndallrwpfnqkv
tlmlldqnnrehvidafrpdvtsssfqrpvndmniasgcplfcpvskmeaknsyvrddai
fikaivdltgl

    Sequence, based on observed residues (ATOM records): (download) 
    >1qscB (B:)
qlersiglkdlamadleqkvlemeastydgvfiwkisdfarkrqeavagripaifspafy
tsrygykmclriylngdgtgrgthlslffvvmkgpndallrwpfnqkvtlmlldqnnreh
vidafrpdvtsssfqrpvndmniasgcplfcpvskmeaknsyvrddaifikaivdltgl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1qscC (C:)
qdkiealsskvqqlersiglkdlamadleqkvlemeastydgvfiwkisdfarkrqeava
gripaifspafytsrygykmclriylngdgtgrgthlslffvvmkgpndallrwpfnqkv
tlmlldqnnrehvidafrpdvtsssfqrpvndmniasgcplfcpvskmeaknsyvrddai
fikaivdltgl

    Sequence, based on observed residues (ATOM records): (download) 
    >1qscC (C:)
qlersiglkdlamadleqkvlemeastydgvfiwkisdfarkrqeavagripaifspafy
tsrygykmclriylngdgtgrgthlslffvvmkgpndallrwpfnqkvtlmlldqnnreh
vidafrpdvtsssfqrpvndmniasgcplfcpvskmeaknsyvrddaifikaivdltgl

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.