PDB entry 1qdm

View 1qdm on RCSB PDB site
Description: crystal structure of prophytepsin, a zymogen of a barley vacuolar aspartic proteinase.
Deposited on 1999-05-19, released 1999-07-16
The last revision prior to the SCOP 1.65 freeze date was dated 1999-07-16, with a file datestamp of 1999-07-15.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.224
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1qdmA (A:)
vrialkkrpidrnsrvatglsggeeqpllsganplrseeegdivalknymnaqyfgeigv
gtppqkftvifdtgssnlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgs
iagyfsedsvtvgdlvvkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwyk
mieqglvsdpvfsfwlnrhvdegeggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdv
lvggkstgfcaggcaaiadsgtsllagptaiiteinekigaagvvsqecktivsqygqqi
ldlllaetqpkkicsqvglctfdgtrgvsagirsvvddepvksnglradpmcsacemavv
wmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpdieftiggkkfalkpe
eyilkvgegaaaqcisgftamdippprgplwilgdvfmgpyhtvfdygklrigfakaa

    Sequence, based on observed residues (ATOM records): (download) 
    >1qdmA (A:)
vrialkkrpidrnsrvatglsgeeegdivalknymnaqyfgeigvgtppqkftvifdtgs
snlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgsiagyfsedsvtvgdl
vvkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwykmieqglvsdpvfsfw
lnrhvggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdvlvggkstgfcaggcaaiad
sgtsllagptaiiteinekigaagvvsqecktivsqygqqildlllaetqpkkicsqvgl
ctadpmcsacemavvwmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpd
ieftiggkkfalkpeeyilkvgegaaaqcisgftamdippprgplwilgdvfmgpyhtvf
dygklrigfakaa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1qdmB (B:)
vrialkkrpidrnsrvatglsggeeqpllsganplrseeegdivalknymnaqyfgeigv
gtppqkftvifdtgssnlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgs
iagyfsedsvtvgdlvvkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwyk
mieqglvsdpvfsfwlnrhvdegeggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdv
lvggkstgfcaggcaaiadsgtsllagptaiiteinekigaagvvsqecktivsqygqqi
ldlllaetqpkkicsqvglctfdgtrgvsagirsvvddepvksnglradpmcsacemavv
wmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpdieftiggkkfalkpe
eyilkvgegaaaqcisgftamdippprgplwilgdvfmgpyhtvfdygklrigfakaa

    Sequence, based on observed residues (ATOM records): (download) 
    >1qdmB (B:)
vrialkkrpidrnsrvatglsgeeegdivalknymnaqyfgeigvgtppqkftvifdtgs
snlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgsiagyfsedsvtvgdl
vvkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwykmieqglvsdpvfsfw
lnrhvggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdvlvggkstgfcaggcaaiad
sgtsllagptaiiteinekigaagvvsqecktivsqygqqildlllaetqpkkicsqvgl
ctadpmcsacemavvwmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpd
ieftiggkkfalkpeeyilkvgegaaaqcisgftamdippprgplwilgdvfmgpyhtvf
dygklrigfakaa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1qdmC (C:)
vrialkkrpidrnsrvatglsggeeqpllsganplrseeegdivalknymnaqyfgeigv
gtppqkftvifdtgssnlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgs
iagyfsedsvtvgdlvvkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwyk
mieqglvsdpvfsfwlnrhvdegeggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdv
lvggkstgfcaggcaaiadsgtsllagptaiiteinekigaagvvsqecktivsqygqqi
ldlllaetqpkkicsqvglctfdgtrgvsagirsvvddepvksnglradpmcsacemavv
wmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpdieftiggkkfalkpe
eyilkvgegaaaqcisgftamdippprgplwilgdvfmgpyhtvfdygklrigfakaa

    Sequence, based on observed residues (ATOM records): (download) 
    >1qdmC (C:)
vrialkkrpidrnsrvatglsgeegdivalknymnaqyfgeigvgtppqkftvifdtgss
nlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgsiagyfsedsvtvgdlv
vkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwykmieqglvsdpvfsfwl
nrhvggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdvlvggkstgfcaggcaaiads
gtsllagptaiiteinekigaagvvsqecktivsqygqqildlllaetqpkkicsqvglc
tadpmcsacemavvwmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpdi
eftiggkkfalkpeeyilkvgegaaqcisgftamdippprgplwilgdvfmgpyhtvfdy
gklrigfakaa