PDB entry 1qdc
View 1qdc on RCSB PDB site
Description: man(aplha1-6)man(alpha1-o)methyl concanavalin a complex
Class: sugar binding protein
Keywords: plant lectin, carbohydrate binding, dimannose, concanavalin a, sugar binding protein
Deposited on
1998-07-14, released
1999-10-14
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.175
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (concanavalin a)
Species: Canavalia ensiformis [TaxId:3823]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1qdca_ - Chain 'B':
Compound: protein (concanavalin a)
Species: Canavalia ensiformis [TaxId:3823]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1qdcb_ - Chain 'C':
Compound: protein (concanavalin a)
Species: Canavalia ensiformis [TaxId:3823]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1qdcc_ - Chain 'D':
Compound: protein (concanavalin a)
Species: Canavalia ensiformis [TaxId:3823]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1qdcd_ - Heterogens: MN, CA, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1qdcA (A:)
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1qdcB (B:)
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1qdcC (C:)
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1qdcD (D:)
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan