PDB entry 1pgz
View 1pgz on RCSB PDB site
Description: Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
Class: DNA binding protein/DNA
Keywords: protein-DNA complex; UP1; human telomeric repeat; hTR; TR2-11F; RRM; RNA Recognition Motif; 6-MI; 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine; hnRNP A1, DNA BINDING PROTEIN/DNA COMPLEX
Deposited on
2003-05-28, released
2003-11-11
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-19.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.235
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: heterogeneous nuclear ribonucleoprotein a1
Species: Homo sapiens [TaxId:9606]
Gene: HNRPA1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1pgza1, d1pgza2 - Chain 'B':
Compound: 5'-d(*t*tp*ap*gp*gp*gp*tp*tp*ap*gp*(6mi)p*g)-3'
Species: synthetic, synthetic
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1pgzA (A:)
sksespkepeqlrklfigglsfettdeslrshfeqwgtltdcvvmrdpntkrsrgfgfvt
yatveevdaamnarphkvdgrvvepkravsredsqrpgahltvkkifvggikedteehhl
rdyfeqygkievieimtdrgsgkkrgfafvtfddhdsvdkiviqkyhtvnghncevrkal
skqemasasssqrgr
Sequence, based on observed residues (ATOM records): (download)
>1pgzA (A:)
kepeqlrklfigglsfettdeslrshfeqwgtltdcvvmrdpntkrsrgfgfvtyatvee
vdaamnarphkvdgrvvepkravsredsqrpgahltvkkifvggikedteehhlrdyfeq
ygkievieimtdrgsgkkrgfafvtfddhdsvdkiviqkyhtvnghncevrkalskqema
sas
- Chain 'B':
No sequence available.