PDB entry 1oyx

View 1oyx on RCSB PDB site
Description: crystal structure of 3-mbt repeats of lethal (3) malignant brain tumor (seleno-met) at 1.85 angstrom
Class: transcription
Keywords: propeller, transcription repressor
Deposited on 2003-04-07, released 2003-08-19
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.209
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lethal(3)malignant brain tumor-like protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L3MBTL OR L3MBT OR KIAA0681
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y468
      • modified residue (45)
      • modified residue (57)
      • modified residue (152)
      • modified residue (160)
      • modified residue (256)
    Domains in SCOPe 2.01: d1oyxa1, d1oyxa2, d1oyxa3
  • Chain 'B':
    Compound: Lethal(3)malignant brain tumor-like protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L3MBTL OR L3MBT OR KIAA0681
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y468
      • modified residue (45)
      • modified residue (57)
      • modified residue (152)
      • modified residue (160)
      • modified residue (256)
    Domains in SCOPe 2.01: d1oyxb1, d1oyxb2, d1oyxb3
  • Chain 'C':
    Compound: Lethal(3)malignant brain tumor-like protein
    Species: Homo sapiens [TaxId:9606]
    Gene: L3MBTL OR L3MBT OR KIAA0681
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y468
      • modified residue (45)
      • modified residue (57)
      • modified residue (152)
      • modified residue (160)
      • modified residue (256)
    Domains in SCOPe 2.01: d1oyxc1, d1oyxc2, d1oyxc3
  • Heterogens: SO4, MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1oyxA (A:)
patgekkecwswesyleeqkaitapvslfqdsqavthnkngfklgmklegidpqhpsmyf
iltvaevcgyrlrlhfdgysechdfwvnanspdihpagwfektghklqppkgykeeefsw
sqylrstraqaapkhlfvsqshsppplgfqvgmkleavdrmnpslvcvasvtdvvdsrfl
vhfdnwddtydywcdpsspyihpvgwcqkqgkpltppqdypdpdnfcwekyleetgasav
ptwafkvrpphsflvnmkleavdrrnpalirvasvedvedhrikihfdgwshgydfwida
dhpdihpagwcsktghplqpplgprepssas

    Sequence, based on observed residues (ATOM records): (download) 
    >1oyxA (A:)
wswesyleeqkaitapvslfqdsqavthnkngfklgmklegidpqhpsmyfiltvaevcg
yrlrlhfdgysechdfwvnanspdihpagwfektghklqppkgykeeefswsqylrstra
qaapkhlfvsqshsppplgfqvgmkleavdrmnpslvcvasvtdvvdsrflvhfdnwddt
ydywcdpsspyihpvgwcqkqgkpltppqdypdpdnfcwekyleetgasavptwafkvrp
phsflvnmkleavdrrnpalirvasvedvedhrikihfdgwshgydfwidadhpdihpag
wcsktghplqppl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1oyxB (B:)
patgekkecwswesyleeqkaitapvslfqdsqavthnkngfklgmklegidpqhpsmyf
iltvaevcgyrlrlhfdgysechdfwvnanspdihpagwfektghklqppkgykeeefsw
sqylrstraqaapkhlfvsqshsppplgfqvgmkleavdrmnpslvcvasvtdvvdsrfl
vhfdnwddtydywcdpsspyihpvgwcqkqgkpltppqdypdpdnfcwekyleetgasav
ptwafkvrpphsflvnmkleavdrrnpalirvasvedvedhrikihfdgwshgydfwida
dhpdihpagwcsktghplqpplgprepssas

    Sequence, based on observed residues (ATOM records): (download) 
    >1oyxB (B:)
wswesyleeqkaitapvslfqdsqavthnkngfklgmklegidpqhpsmyfiltvaevcg
yrlrlhfdgysechdfwvnanspdihpagwfektghklqppkgykeeefswsqylrstra
qaapkhlfvsqshsppplgfqvgmkleavdrmnpslvcvasvtdvvdsrflvhfdnwddt
ydywcdpsspyihpvgwcqkqgkpltppqdypdpdnfcwekyleetgasavptwafkvrp
phsflvnmkleavdrrnpalirvasvedvedhrikihfdgwshgydfwidadhpdihpag
wcsktghplqppl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1oyxC (C:)
patgekkecwswesyleeqkaitapvslfqdsqavthnkngfklgmklegidpqhpsmyf
iltvaevcgyrlrlhfdgysechdfwvnanspdihpagwfektghklqppkgykeeefsw
sqylrstraqaapkhlfvsqshsppplgfqvgmkleavdrmnpslvcvasvtdvvdsrfl
vhfdnwddtydywcdpsspyihpvgwcqkqgkpltppqdypdpdnfcwekyleetgasav
ptwafkvrpphsflvnmkleavdrrnpalirvasvedvedhrikihfdgwshgydfwida
dhpdihpagwcsktghplqpplgprepssas

    Sequence, based on observed residues (ATOM records): (download) 
    >1oyxC (C:)
wswesyleeqkaitapvslfqdsqavthnkngfklgmklegidpqhpsmyfiltvaevcg
yrlrlhfdgysechdfwvnanspdihpagwfektghklqppkgykeeefswsqylrstra
qaapkhlfvsqshsppplgfqvgmkleavdrmnpslvcvasvtdvvdsrflvhfdnwddt
ydywcdpsspyihpvgwcqkqgkpltppqdypdpdnfcwekyleetgasavptwafkvrp
phsflvnmkleavdrrnpalirvasvedvedhrikihfdgwshgydfwidadhpdihpag
wcsktghplqppl