PDB entry 1o6z

View 1o6z on RCSB PDB site
Description: 1.95 a resolution structure of (r207s,r292s) mutant of malate dehydrogenase from the halophilic archaeon haloarcula marismortui (holo form)
Class: oxidoreductase
Keywords: halophilic, ion-binding, protein-solvent interaction, malate dehydrogenase, oxidoreductase
Deposited on 2002-10-22, released 2003-02-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.19365
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Haloarcula marismortui [TaxId:2238]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q07841 (273-302)
      • engineered mutation (186)
      • engineered mutation (265)
    Domains in SCOPe 2.06: d1o6za1, d1o6za2
  • Chain 'B':
    Compound: malate dehydrogenase
    Species: Haloarcula marismortui [TaxId:2238]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q07841 (273-302)
      • engineered mutation (186)
      • engineered mutation (265)
    Domains in SCOPe 2.06: d1o6zb1, d1o6zb2
  • Chain 'C':
    Compound: malate dehydrogenase
    Species: Haloarcula marismortui [TaxId:2238]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q07841 (273-302)
      • engineered mutation (186)
      • engineered mutation (265)
    Domains in SCOPe 2.06: d1o6zc1, d1o6zc2
  • Chain 'D':
    Compound: malate dehydrogenase
    Species: Haloarcula marismortui [TaxId:2238]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q07841 (273-302)
      • engineered mutation (186)
      • engineered mutation (265)
    Domains in SCOPe 2.06: d1o6zd1, d1o6zd2
  • Heterogens: CL, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1o6zA (A:)
tkvsvvgaagtvgaaagynialrdiadevvfvdipdkeddtvgqaadtnhgiaydsntrv
rqggyedtagsdvvvitagiprqpgqtridlagdnapimediqssldehnddyislttsn
pvdllnrhlyeagdrsreqvigfggrldsarfryvlseefdapvqnvegtilgehgdaqv
pvfskvsvdgtdpefsgdekeqllgdlqesamdvierkgatewgpargvahmveailhdt
gevlpasvklegefghedtafgvpvslgsngveeivewdlddyeqdlmadaaeklsdqyd
kis

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1o6zB (B:)
tkvsvvgaagtvgaaagynialrdiadevvfvdipdkeddtvgqaadtnhgiaydsntrv
rqggyedtagsdvvvitagiprqpgqtridlagdnapimediqssldehnddyislttsn
pvdllnrhlyeagdrsreqvigfggrldsarfryvlseefdapvqnvegtilgehgdaqv
pvfskvsvdgtdpefsgdekeqllgdlqesamdvierkgatewgpargvahmveailhdt
gevlpasvklegefghedtafgvpvslgsngveeivewdlddyeqdlmadaaeklsdqyd
kis

    Sequence, based on observed residues (ATOM records): (download) 
    >1o6zB (B:)
tkvsvvgaagtvgaaagynialrdiadevvfvdipdkeddtvgqaadtnhgiaydsntrv
rqggyedtagsdvvvitagiqtridlagdnapimediqssldehnddyislttsnpvdll
nrhlyeagdrsreqvigfggrldsarfryvlseefdapvqnvegtilgehgdaqvpvfsk
vsvdgtdpefsgdekeqllgdlqesamdvierkgatewgpargvahmveailhdtgevlp
asvklegefghedtafgvpvslgsngveeivewdlddyeqdlmadaaeklsdqydkis

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1o6zC (C:)
tkvsvvgaagtvgaaagynialrdiadevvfvdipdkeddtvgqaadtnhgiaydsntrv
rqggyedtagsdvvvitagiprqpgqtridlagdnapimediqssldehnddyislttsn
pvdllnrhlyeagdrsreqvigfggrldsarfryvlseefdapvqnvegtilgehgdaqv
pvfskvsvdgtdpefsgdekeqllgdlqesamdvierkgatewgpargvahmveailhdt
gevlpasvklegefghedtafgvpvslgsngveeivewdlddyeqdlmadaaeklsdqyd
kis

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1o6zD (D:)
tkvsvvgaagtvgaaagynialrdiadevvfvdipdkeddtvgqaadtnhgiaydsntrv
rqggyedtagsdvvvitagiprqpgqtridlagdnapimediqssldehnddyislttsn
pvdllnrhlyeagdrsreqvigfggrldsarfryvlseefdapvqnvegtilgehgdaqv
pvfskvsvdgtdpefsgdekeqllgdlqesamdvierkgatewgpargvahmveailhdt
gevlpasvklegefghedtafgvpvslgsngveeivewdlddyeqdlmadaaeklsdqyd
kis

    Sequence, based on observed residues (ATOM records): (download) 
    >1o6zD (D:)
tkvsvvgaagtvgaaagynialrdiadevvfvdipdkeddtvgqaadtnhgiaydsntrv
rqggyedtagsdvvvitagiqtridlagdnapimediqssldehnddyislttsnpvdll
nrhlyeagdrsreqvigfggrldsarfryvlseefdapvqnvegtilgehgdaqvpvfsk
vsvdgtdpefsgdekeqllgdlqesamdvierkgatewgpargvahmveailhdtgevlp
asvklegefghedtafgvpvslgsngveeivewdlddyeqdlmadaaeklsdqydkis