PDB entry 1o6s

View 1o6s on RCSB PDB site
Description: internalin (listeria monocytogenes) / e-cadherin (human) recognition complex
Class: bacterial infection
Keywords: bacterial infection, leucine rich repeat, cell adhesion, cell-wall surface protein
Deposited on 2002-10-13, released 2002-12-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.171
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: internalin a
    Species: LISTERIA MONOCYTOGENES [TaxId:169963]
    Database cross-references and differences (RAF-indexed):
    • PDB 1O6S
    • Uniprot P25146 (5-465)
    Domains in SCOPe 2.07: d1o6sa1, d1o6sa2
  • Chain 'B':
    Compound: e-cadherin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1o6sb1, d1o6sb2
  • Heterogens: CA, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1o6sA (A:)
gplgsatitqdtpinqiftdtalaekmktvlgktnvtdtvsqtdldqvttlqadrlgiks
idgveylnnltqinfsnnqltditplknltklvdilmnnnqiaditplanltnltgltlf
nnqitdidplknltnlnrlelssntisdisalsgltslqqlsfgnqvtdlkplanlttle
rldissnkvsdisvlakltnlesliatnnqisditplgiltnldelslngnqlkdigtla
sltnltdldlannqisnlaplsgltkltelklganqisnisplagltaltnlelnenqle
dispisnlknltyltlyfnnisdispvssltklqrlffynnkvsdvsslanltninwlsa
ghnqisdltplanltritqlglndqawtnapvnykanvsipntvknvtgaliapatisdg
gsytepditwnlpsytnevsytfsqpvtigkgtttfsgtvtqplka

    Sequence, based on observed residues (ATOM records): (download) 
    >1o6sA (A:)
atitqdtpinqiftdtalaekmktvlgktnvtdtvsqtdldqvttlqadrlgiksidgve
ylnnltqinfsnnqltditplknltklvdilmnnnqiaditplanltnltgltlfnnqit
didplknltnlnrlelssntisdisalsgltslqqlsfgnqvtdlkplanlttlerldis
snkvsdisvlakltnlesliatnnqisditplgiltnldelslngnqlkdigtlasltnl
tdldlannqisnlaplsgltkltelklganqisnisplagltaltnlelnenqledispi
snlknltyltlyfnnisdispvssltklqrlffynnkvsdvsslanltninwlsaghnqi
sdltplanltritqlglndqawtnapvnykanvsipntvknvtgaliapatisdggsyte
pditwnlpsytnevsytfsqpvtigkgtttfsgtvtqplka

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1o6sB (B:)
gplgswvippiscpenekgpfpknlvqiksnkdkegkvfysitgqgadtppvgvfiiere
tgwlkvtepldreriatytlfshavssngnavedpmeilitvtdq