PDB entry 1nbq
View 1nbq on RCSB PDB site
Description: Crystal Structure of Human Junctional Adhesion Molecule Type 1
Class: immune system
Keywords: reovirus receptor, adhesion molecule, tight junction formation, immunoglobulin superfamily, IMMUNE SYSTEM
Deposited on
2002-12-03, released
2003-04-01
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-19.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.22
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Junctional adhesion molecule 1
Species: Homo sapiens [TaxId:9606]
Gene: JAM1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1nbqa1, d1nbqa2, d1nbqa3 - Chain 'B':
Compound: Junctional adhesion molecule 1
Species: Homo sapiens [TaxId:9606]
Gene: JAM1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1nbqb1, d1nbqb2, d1nbqb3 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1nbqA (A:)
amgsvtvhssepevripennpvklscaysgfssprvewkfdqgdttrlvcynnkitasye
drvtflptgitfksvtredtgtytcmvseeggnsygevkvklivlvppskptvnipssat
ignravltcseqdgsppseytwfkdgivmptnpkstrafsnssyvlnpttgelvfdplsa
sdtgeyscearngygtpmtsnavrmeave
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1nbqB (B:)
amgsvtvhssepevripennpvklscaysgfssprvewkfdqgdttrlvcynnkitasye
drvtflptgitfksvtredtgtytcmvseeggnsygevkvklivlvppskptvnipssat
ignravltcseqdgsppseytwfkdgivmptnpkstrafsnssyvlnpttgelvfdplsa
sdtgeyscearngygtpmtsnavrmeave
Sequence, based on observed residues (ATOM records): (download)
>1nbqB (B:)
mgsvtvhssepevripennpvklscaysgfssprvewkfdqgdttrlvcynnkitasyed
rvtflptgitfksvtredtgtytcmvseeggnsygevkvklivlvppskptvnipssati
gnravltcseqdgsppseytwfkdgivmptnpkstrafsnssyvlnpttgelvfdplsas
dtgeyscearngygtpmtsnavrmeave