PDB entry 1n60

View 1n60 on RCSB PDB site
Description: Crystal Structure of the Cu,Mo-CO Dehydrogenase (CODH); Cyanide-inactivated Form
Class: oxidoreductase
Keywords: CODH, molybdenum, molybdopterin, oxidoreductase
Deposited on 2002-11-08, released 2002-12-18
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.19 Å
R-factor: 0.143
AEROSPACI score: 0.85 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Carbon monoxide dehydrogenase small chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1n60a1, d1n60a2
  • Chain 'B':
    Compound: Carbon monoxide dehydrogenase large chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1n60b1, d1n60b2
  • Chain 'C':
    Compound: Carbon monoxide dehydrogenase medium chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1n60c1, d1n60c2
  • Chain 'D':
    Compound: Carbon monoxide dehydrogenase small chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1n60d1, d1n60d2
  • Chain 'E':
    Compound: Carbon monoxide dehydrogenase large chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1n60e1, d1n60e2
  • Chain 'F':
    Compound: Carbon monoxide dehydrogenase medium chain
    Species: Oligotropha carboxidovorans [TaxId:504832]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1n60f1, d1n60f2
  • Heterogens: PO4, FES, OMO, MCN, FAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1n60A (A:)
    makahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvk
    sctmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqen
    pspteaeirfgiggnlcrctgyqnivkaiqyaaakingvpfeeaae
    

    Sequence, based on observed residues (ATOM records): (download)
    >1n60A (A:)
    kahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvksc
    tmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqenps
    pteaeirfgiggnlcrctgyqnivkaiqyaaakingvpfee
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1n60B (B:)
    mniqttveptsaeraeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrssha
    hariksidtskakalpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevaf
    vvakdryvaadaielvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnh
    ifrweigdkegtdatfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfq
    aphvirtvvslisglpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwved
    rmenlsttsfardyhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnict
    gsydmpvahlavdgvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlrik
    nfiqpeqfpymaplgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimg
    igisffteivgagpskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqii
    atelgipaddimieegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmle
    vhegdlewdvdrfrvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfg
    ayfcimdidvdtgvaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeq
    gnvlgasfmdfflptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavnda
    yaflnaghiqmphdawrlwkvgeqlglhv
    

    Sequence, based on observed residues (ATOM records): (download)
    >1n60B (B:)
    veptsaeraeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrsshahariks
    idtskakalpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevafvvakdr
    yvaadaielvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnhifrwei
    gdkegtdatfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfqaphvir
    tvvslisglpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwvedrmenls
    ttsfardyhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnictgsydmp
    vahlavdgvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlriknfiqpe
    qfpymaplgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimgigisff
    teivgagpskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqiiatelgi
    paddimieegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmlevhegdl
    ewdvdrfrvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfgayfcim
    didvdtgvaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeqgnvlga
    sfmdfflptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavndayaflna
    ghiqmphdawrlwkvgeqlglhv
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1n60C (C:)
    mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
    vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
    pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
    yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
    paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakarakn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1n60C (C:)
    mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
    vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
    pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
    yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
    paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakara
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1n60D (D:)
    makahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvk
    sctmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqen
    pspteaeirfgiggnlcrctgyqnivkaiqyaaakingvpfeeaae
    

    Sequence, based on observed residues (ATOM records): (download)
    >1n60D (D:)
    kahieltinghpvealveprtllihfireqqnltgahigcdtshcgactvdldgmsvksc
    tmfavqangasittiegmaapdgtlsalqegfrmmhglqcgyctpgmimrshrllqenps
    pteaeirfgiggnlcrctgyqnivkaiqyaaakingvp
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1n60E (E:)
    mniqttveptsaeraeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrssha
    hariksidtskakalpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevaf
    vvakdryvaadaielvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnh
    ifrweigdkegtdatfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfq
    aphvirtvvslisglpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwved
    rmenlsttsfardyhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnict
    gsydmpvahlavdgvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlrik
    nfiqpeqfpymaplgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimg
    igisffteivgagpskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqii
    atelgipaddimieegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmle
    vhegdlewdvdrfrvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfg
    ayfcimdidvdtgvaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeq
    gnvlgasfmdfflptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavnda
    yaflnaghiqmphdawrlwkvgeqlglhv
    

    Sequence, based on observed residues (ATOM records): (download)
    >1n60E (E:)
    raeklqgmgckrkrvedirftqgkgnyvddvklpgmlfgdfvrsshahariksidtskak
    alpgvfavltaadlkplnlhymptlagdvqavladekvlfqnqevafvvakdryvaadai
    elvevdyeplpvlvdpfkamepdapllredikdkmtgahgarkhhnhifrweigdkegtd
    atfakaevvskdmftyhrvhpspletcqcvasmdkikgeltlwgtfqaphvirtvvslis
    glpehkihviapdigggfgnkvgaysgyvcavvasivlgvpvkwvedrmenlsttsfard
    yhmttelaatkdgkilamrchvladhgafdacadpskwpagfmnictgsydmpvahlavd
    gvytnkasggvayrcsfrvteavyaieraietlaqrlemdsadlriknfiqpeqfpymap
    lgweydsgnyplamkkamdtvgyhqlraeqkakqeafkrgetreimgigisffteivgag
    pskncdilgvsmfdsaeirihptgsviarmgtksqgqghettyaqiiatelgipaddimi
    eegntdtapyglgtygsrstptagaatavaarkikakaqmiaahmlevhegdlewdvdrf
    rvkglpekfktmkelawasynspppnlepgleavnyydppnmtypfgayfcimdidvdtg
    vaktrrfyalddcgtrinpmiiegqvhgglteafavamgqeirydeqgnvlgasfmdffl
    ptavetpkwetdytvtpsphhpigakgvgesphvggvpcfsnavndayaflnaghiqmph
    dawrlwkvgeqlglhv
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1n60F (F:)
    mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
    vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
    pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
    yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
    paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakarakn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1n60F (F:)
    mipgsfdyhrpksiadavalltklgedarplagghslipimktrlatpehlvdlrdigdl
    vgireegtdvvigamttqhaligsdflaaklpiiretslliadpqirymgtiggnaangd
    pgndmpalmqclgaayeltgpegarivaardyyqgayftaiepgelltairipvpptghg
    yayeklkrkigdyataaaavvltmsggkcvtasigltnvantplwaeeagkvlvgtaldk
    paldkavalaeaitapasdgrgpaeyrtkmagvmlrraverakara