PDB entry 1n2m

View 1n2m on RCSB PDB site
Description: The S53A Proenzyme Structure of Methanococcus jannaschii.
Class: lyase
Keywords: pyruvoyl group, pyruvate, agmatine, arginine decarboxylase, LYASE
Deposited on 2002-10-23, released 2003-03-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.186
AEROSPACI score: -1.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyruvoyl-dependent arginine decarboxylase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0316
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57764 (Start-164)
      • see remark 999 (52)
    Domains in SCOPe 2.06: d1n2ma_
  • Chain 'B':
    Compound: Pyruvoyl-dependent arginine decarboxylase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0316
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57764 (Start-164)
      • see remark 999 (52)
    Domains in SCOPe 2.06: d1n2mb_
  • Chain 'C':
    Compound: Pyruvoyl-dependent arginine decarboxylase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0316
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57764 (Start-164)
      • see remark 999 (52)
    Domains in SCOPe 2.06: d1n2mc_
  • Chain 'D':
    Compound: Pyruvoyl-dependent arginine decarboxylase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0316
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57764 (Start-164)
      • see remark 999 (52)
    Domains in SCOPe 2.06: d1n2md_
  • Chain 'E':
    Compound: Pyruvoyl-dependent arginine decarboxylase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0316
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57764 (Start-164)
      • see remark 999 (52)
    Domains in SCOPe 2.06: d1n2me_
  • Chain 'F':
    Compound: Pyruvoyl-dependent arginine decarboxylase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0316
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57764 (Start-164)
      • see remark 999 (52)
    Domains in SCOPe 2.06: d1n2mf_
  • Heterogens: MRD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1n2mA (A:)
mnaeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeae
ivplpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeae
ktvremakigfemrgweldriesiavehtveklgcafaaaalwyk

    Sequence, based on observed residues (ATOM records): (download) 
    >1n2mA (A:)
plhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeaeivplpk
lpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeaektvrem
akigfemrgweldriesiavehtveklgcafaaaalwyk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1n2mB (B:)
mnaeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeae
ivplpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeae
ktvremakigfemrgweldriesiavehtveklgcafaaaalwyk

    Sequence, based on observed residues (ATOM records): (download) 
    >1n2mB (B:)
nplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeaeivplp
klpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeaektvre
makigfemrgweldriesiavehtveklgcafaaaalwyk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1n2mC (C:)
mnaeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeae
ivplpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeae
ktvremakigfemrgweldriesiavehtveklgcafaaaalwyk

    Sequence, based on observed residues (ATOM records): (download) 
    >1n2mC (C:)
aeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeaeiv
plpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeaekt
vremakigfemrgweldriesiavehtveklgcafaaaalwyk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1n2mD (D:)
mnaeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeae
ivplpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeae
ktvremakigfemrgweldriesiavehtveklgcafaaaalwyk

    Sequence, based on observed residues (ATOM records): (download) 
    >1n2mD (D:)
fklpntvslvagssegetplnafdgallnagignvnlirisaimppeaeivplpklpmga
lvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeaektvremakigf
emrgweldriesiavehtveklgcafaaaalwyk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1n2mE (E:)
mnaeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeae
ivplpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeae
ktvremakigfemrgweldriesiavehtveklgcafaaaalwyk

    Sequence, based on observed residues (ATOM records): (download) 
    >1n2mE (E:)
einplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeaeivp
lpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeaektv
remakigfemrgweldriesiavehtveklgcafaaaalwyk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1n2mF (F:)
mnaeinplhayfklpntvslvagssegetplnafdgallnagignvnlirisaimppeae
ivplpklpmgalvptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeae
ktvremakigfemrgweldriesiavehtveklgcafaaaalwyk

    Sequence, based on observed residues (ATOM records): (download) 
    >1n2mF (F:)
klpntvslvagssegetplnafdgallnagignvnlirisaimppeaeivplpklpmgal
vptaygyiisdvpgetisaaisvaipkdkslcglimeyegkcskkeaektvremakigfe
mrgweldriesiavehtveklgcafaaaalwyk