PDB entry 1m11

View 1m11 on RCSB PDB site
Description: structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy
Class: Virus/Receptor
Keywords: decay-accelerating factor, SCR, Icosahedral virus, Virus-Receptor COMPLEX
Deposited on 2002-06-17, released 2002-08-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: coat protein vp1
    Species: Human enterovirus B [TaxId:46018]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m111_
  • Chain '2':
    Compound: coat protein vp2
    Species: Human enterovirus B [TaxId:46018]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m112_
  • Chain '3':
    Compound: coat protein vp3
    Species: Human enterovirus B [TaxId:46018]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m113_
  • Chain 'R':
    Compound: decay-accelerating factor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m11r_

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m111 (1:)
gdtetaidnaiarvadtvasgpsnstsipaltavetghtsqvepsdtmqtrhvknyhsrs
estvenflsrsacvyieeyytkdqdnvnrymswtinarrmvqlrrkfelftymrfdmeit
fvitsrqlpgtsiaqdmpplthqimyippggpvpnsvtdfawqtstnpsifwtegnappr
msipfisignaysnfydgwshfsqngvygynalnnmgklyarhvnkdtpyqmsstirvyf
kpkhirvwvprpprlspyikssnvnfnptnltderssi

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m112 (2:)
gysdrvrsltlgnstittqesanvvvgygrwpeylrddeataedqptqpdvatcrfytle
svqweknsagwwwkfpealkdmglfgqnmlyhylgragytihvqcnaskfhqgcllvvcv
peaemgcsqtdkevaamnltkgeaahkfeptkttgehtvqsivcnagmgvgvgnltiyph
qwinlrtnncativmpyvnsvpmdnmfrhynftlmvipfapldyaaqaseyvpvtvtiap
mcaeynglrlayqq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m113 (3:)
gfpvlntpgsnqfmtsddfqspsampqfdvtphmdipgevhnlmeiaevdsvvpvnnikv
nlqsmdayhievntgnhqgekifafqmqpglesvfkrtlmgeilnyyahwsgsikltftf
cgsamatgklllaysppgadvpatrkqamlgthmiwdiglqsscvlcipwisqthyrlvq
qdeytsagnvtcwyqtgivvppgtpnkcvvlcfasacndfsvrmlrdtpfigqtallq

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m11R (R:)
dcglppdvpnaqpalegrtsfpedtvitykceesfvkipgekdsviclkgsqwsdieefc
nrscevptrlnsaslkqpyitqnyfpvgtvveyecrpgyrrepslspkltclqnlkwsta
vefckkkscpnpgeirngqidvpggilfgatisfscntgyklfgstssfclisgssvqws
dplpecreiycpappqidngiiqgerdhygyrqsvtyacnkgftmigehsiyctvnndeg
ews