PDB entry 1lot

View 1lot on RCSB PDB site
Description: crystal structure of the complex of actin with vitamin d-binding protein
Class: transport protein, structural protein
Keywords: transport protein, structural protein
Deposited on 2002-05-07, released 2002-07-31
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.226
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vitamin D-binding protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02774 (0-End)
      • see remark 999 (419)
    Domains in SCOPe 2.04: d1lota1, d1lota2, d1lota3
  • Chain 'B':
    Compound: Actin, alpha skeletal muscle
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1lotb1, d1lotb2
  • Heterogens: CA, ATP, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1lotA (A:)
    lergrdyeknkvckefshlgkedftslslvlysrkfpsgtfeqvsqlvkevvslteacca
    egadpdcydtrtsalsakscesnspfpvhpgtaecctkeglerklcmaalkhqpqefpty
    veptndeiceafrkdpkeyanqfmweystnygqaplsllvsytksylsmvgscctsaspt
    vcflkerlqlkhlsllttlsnrvcsqyaaygekksrlsnliklaqkvptadledvlplae
    ditnilskccesasedcmakelpehtvklcdnlstknskfedccqektamdvfvctyfmp
    aaqlpelpdvelptnkdvcdpgntkvmdkytfelsrrthlpevflskvleptlkslgecc
    dvedsttcfnakgpllkkelssfidkgqelcadysentfteykkklaerlkaklpdatpt
    elaklvnkrsdfasnccsinspplycdseidaelknil
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lotA (A:)
    lergrdyeknkvckefshlgkedftslslvlysrkfpsgtfeqvsqlvkevvslteacca
    egadpdcydtrtsalsakscesnspfpvhphqpqefptyveptndeiceafrkdpkeyan
    qfmweystnygqaplsllvsytksylsmvgscctsasptvcflkerlqlkhlsllttlsn
    rvcsqyaaygekksrlsnliklaqkvptadledvlplaeditnilskccesasedcmake
    lpehtvklcdnlstknskfedccqektamdvfvctyfmpaaqlpelpdvelptnkdvcdp
    gntkvmdkytfelsrrthlpevflskvleptlkslgeccdvedsttcfnakgpllkkels
    sfidkgqelcadysentfteykkklaerlkaklpdatptelaklvnkrsdfasnccsins
    pplycdseidaelkni
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1lotB (B:)
    dedettalvcdngsglvkagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaqs
    krgiltlkypiehgiitnwddmekiwhhtfynelrvapeehptllteaplnpkanrekmt
    qimfetfnvpamyvaiqavlslyasgrttgivldsgdgvthnvpiyegyalphaimrldl
    agrdltdylmkiltergysfvttaereivrdikeklcyvaldfenemataassssleksy
    elpdgqvitignerfrcpetlfqpsfigmesagihettynsimkcdidirkdlyannvms
    ggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwitkq
    eydeagpsivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >1lotB (B:)
    dettalvcdngsglvkagfagddapravfpsivgrprdsyvgdeaqskrgiltlkypieh
    giitnwddmekiwhhtfynelrvapeehptllteaplnpkanrekmtqimfetfnvpamy
    vaiqavlslyasgrttgivldsgdgvthnvpiyegyalphaimrldlagrdltdylmkil
    tergysfvttaereivrdikeklcyvaldfenemataassssleksyelpdgqvitigne
    rfrcpetlfqpsfigmesagihettynsimkcdidirkdlyannvmsggttmypgiadrm
    qkeitalapstmkikiiapperkysvwiggsilaslstfqqmwitkqeydeagpsivhrk