PDB entry 1l3i
View 1l3i on RCSB PDB site
Description: mt0146, the precorrin-6y methyltransferase (cbit) homolog from m. thermoautotrophicum, adohcy binary complex
Class: transferase, lyase
Keywords: structural genomics, beta barrel, rossmann fold, tetramer, methyltransferase, decarboxylase, structure-based function assignment, transferase, lyase
Deposited on
2002-02-27, released
2002-11-27
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.212
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Precorrin-6y methyltransferase/putative decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: MTH146
Database cross-references and differences (RAF-indexed):
- Uniprot O26249 (0-End)
- modified residue (0)
- modified residue (18)
- modified residue (25)
- modified residue (72)
- modified residue (86)
- modified residue (143)
- modified residue (171-172)
Domains in SCOPe 2.07: d1l3ia_ - Chain 'B':
Compound: Precorrin-6y methyltransferase/putative decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: MTH146
Database cross-references and differences (RAF-indexed):
- Uniprot O26249 (0-End)
- modified residue (0)
- modified residue (18)
- modified residue (25)
- modified residue (72)
- modified residue (86)
- modified residue (143)
- modified residue (171-172)
Domains in SCOPe 2.07: d1l3ib_ - Chain 'C':
Compound: Precorrin-6y methyltransferase/putative decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: MTH146
Database cross-references and differences (RAF-indexed):
- Uniprot O26249 (0-End)
- modified residue (0)
- modified residue (18)
- modified residue (25)
- modified residue (72)
- modified residue (86)
- modified residue (143)
- modified residue (171-172)
Domains in SCOPe 2.07: d1l3ic_ - Chain 'D':
Compound: Precorrin-6y methyltransferase/putative decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: MTH146
Database cross-references and differences (RAF-indexed):
- Uniprot O26249 (0-End)
- modified residue (0)
- modified residue (18)
- modified residue (25)
- modified residue (72)
- modified residue (86)
- modified residue (143)
- modified residue (171-172)
Domains in SCOPe 2.07: d1l3id_ - Chain 'E':
Compound: Precorrin-6y methyltransferase/putative decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: MTH146
Database cross-references and differences (RAF-indexed):
- Uniprot O26249 (0-End)
- modified residue (0)
- modified residue (18)
- modified residue (25)
- modified residue (72)
- modified residue (86)
- modified residue (143)
- modified residue (171-172)
Domains in SCOPe 2.07: d1l3ie_ - Chain 'F':
Compound: Precorrin-6y methyltransferase/putative decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: MTH146
Database cross-references and differences (RAF-indexed):
- Uniprot O26249 (0-End)
- modified residue (0)
- modified residue (18)
- modified residue (25)
- modified residue (72)
- modified residue (86)
- modified residue (143)
- modified residue (171-172)
Domains in SCOPe 2.07: d1l3if_ - Heterogens: SAH, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1l3iA (A:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgvshenkd
Sequence, based on observed residues (ATOM records): (download)
>1l3iA (A:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1l3iB (B:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgvshenkd
Sequence, based on observed residues (ATOM records): (download)
>1l3iB (B:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgv
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1l3iC (C:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgvshenkd
Sequence, based on observed residues (ATOM records): (download)
>1l3iC (C:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgv
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1l3iD (D:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgvshenkd
Sequence, based on observed residues (ATOM records): (download)
>1l3iD (D:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgv
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1l3iE (E:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgvshenkd
Sequence, based on observed residues (ATOM records): (download)
>1l3iE (E:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgv
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1l3iF (F:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgvshenkd
Sequence, based on observed residues (ATOM records): (download)
>1l3iF (F:)
mipddefiknpsvpgptamevrclimclaepgkndvavdvgcgtggvtlelagrvrrvya
idrnpeaisttemnlqrhglgdnvtlmegdapealckipdidiavvggsggelqeilrii
kdklkpggriivtailletkfeameclrdlgfdvnitelniargraldrgtmmvsrnpva
liytgv