PDB entry 1ku8

View 1ku8 on RCSB PDB site
Description: Crystal structure of Jacalin
Class: sugar binding protein
Keywords: lectin, beta-prism fold, carbohydrate binding, sugar binding protein
Deposited on 2002-01-21, released 2002-06-19
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.191
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: jacalin alpha chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.1
  • Chain 'B':
    Compound: jacalin beta chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.1
  • Chain 'C':
    Compound: jacalin alpha chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.2
  • Chain 'D':
    Compound: jacalin beta chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.2
  • Chain 'E':
    Compound: jacalin alpha chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.3
  • Chain 'F':
    Compound: jacalin beta chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.3
  • Chain 'G':
    Compound: jacalin alpha chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.4
  • Chain 'H':
    Compound: jacalin beta chain
    Species: Artocarpus integer [TaxId:3490]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ku8.4
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ku8A (A:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ku8B (B:)
neqsgisqtvivgpwgak

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ku8C (C:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ku8D (D:)
neqsgisqtvivgpwgak

    Sequence, based on observed residues (ATOM records): (download) 
    >1ku8D (D:)
qsgisqtvivgpwgak

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ku8E (E:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1ku8F (F:)
neqsgisqtvivgpwgak

    Sequence, based on observed residues (ATOM records): (download) 
    >1ku8F (F:)
qsgisqtvivgpwga

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ku8G (G:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1ku8H (H:)
neqsgisqtvivgpwgak

    Sequence, based on observed residues (ATOM records): (download) 
    >1ku8H (H:)
sgisqtvivgpwgak