PDB entry 1k3z

View 1k3z on RCSB PDB site
Description: X-ray crystal structure of the IkBb/NF-kB p65 homodimer complex
Class: transcription
Keywords: protein-protein complex, transcription factors, nuclear localization
Deposited on 2001-10-04, released 2002-10-04
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.181
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcription factor p65
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1k3za_
  • Chain 'B':
    Compound: Transcription factor p65
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1k3zb_
  • Chain 'D':
    Compound: transcription factor inhibitor I-kappa-B-beta
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d1k3zd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1k3zA (A:)
taelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvai
vfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyetfk
simkkspfngpteprp

    Sequence, based on observed residues (ATOM records): (download) 
    >1k3zA (A:)
taelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvai
vfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyetfk
simkkspfng

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1k3zB (B:)
taelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvai
vfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyetfk
simkkspfngpteprp

    Sequence, based on observed residues (ATOM records): (download) 
    >1k3zB (B:)
taelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvai
vfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyet

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1k3zD (D:)
vfgyvtedgdtalhlavihqhepfldfllgfsagheyldlqndlgqtalhlaailgeast
veklyaagagvlvaergghtalhlacrvrahtcacvllqprpshprdasdtyltqsqdct
pdtshapaavdsqpnpeneeeprdedwrlqleaenydghtplhvavihkdaemvrllrda
gadlnkpeptcgrtplhlaveaqaasvlelllkagadptarmyggrtplgsallrpnpil
arllrahgapepedggdklspceeegededsdnrdegdeydd

    Sequence, based on observed residues (ATOM records): (download) 
    >1k3zD (D:)
gyvtedgdtalhlavihqhepfldfllgfsagheyldlqndlgqtalhlaailgeastve
klyaagagvlvaergghtalhlacrvrahtcacvllqprpshprdedwrlqleaenydgh
tplhvavihkdaemvrllrdagadlnkpeptcgrtplhlaveaqaasvlelllkagadpt
armyggrtplgsallrpnpilarllrahgapepedggdkls