PDB entry 1k1d

View 1k1d on RCSB PDB site
Description: Crystal structure of D-hydantoinase
Class: hydrolase
Keywords: D-hydantoinase, HYDROLASE
Deposited on 2001-09-25, released 2002-08-14
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.01 Å
R-factor: 0.263
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1da1, d1k1da2
  • Chain 'B':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1db1, d1k1db2
  • Chain 'C':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1dc1, d1k1dc2
  • Chain 'D':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1dd1, d1k1dd2
  • Chain 'E':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1de1, d1k1de2
  • Chain 'F':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1df1, d1k1df2
  • Chain 'G':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1dg1, d1k1dg2
  • Chain 'H':
    Compound: D-hydantoinase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1k1dh1, d1k1dh2
  • Heterogens: ZN

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dA (A:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dB (B:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dC (C:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dD (D:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dE (E:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dF (F:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dG (G:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1k1dH (H:)
mtkiikngtivtatdtyeahllikdgkiamigqnleekgaevidakgcyvfpggidphth
ldmplggtvtkddfesgtiaaafggtttiidfcltnkgeplkkaietwhnkangkavidy
gfhlmiseitddvleelpkvleeegitslkvfmayknvfqaddgtlyctllaakelgalv
mvhaengdvidyltkkaladgntdpiyhaltrppelegeatgracqltelagsqlyvvhv
tcaqavekiaearnkgldvwgetcpqylvldqsylekpnfegakyvwspplrekwhqevl
wnalkngqlqtlgsdqcsfdfkgqkelgrgdftkipnggpiiedrvsilfsegvkkgrit
lnqfvdivstriaklfglfpkkgtivvgsdadlvifdpniervisaethhmavdynafeg
mkvtgepvsvlcrgefvvrdkqfvgkpgygqylkrakygt