PDB entry 1jy3

View 1jy3 on RCSB PDB site
Description: Crystal Structure of the Central Region of Bovine Fibrinogen (E5 Fragment) at 1.4 Angstroms Resolution
Class: blood clotting
Keywords: fibrinogen, fragment E, disulfide bonds, asymmetry, coiled-coil, beta-sheet, crystal structure
Deposited on 2001-09-10, released 2001-10-17
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.194
AEROSPACI score: 0.71 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'N':
    Compound: fibrinogen alpha chain
    Species: BOS TAURUS
    Domains in SCOP 1.75: d1jy3n_
  • Chain 'O':
    Compound: fibrinogen beta chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy3o_
  • Chain 'P':
    Compound: fibrinogen gamma-b chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy3p_
  • Chain 'Q':
    Compound: fibrinogen alpha chain
    Species: BOS TAURUS
    Domains in SCOP 1.75: d1jy3q_
  • Chain 'R':
    Compound: fibrinogen beta chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy3r_
  • Chain 'S':
    Compound: fibrinogen gamma-b chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy3s_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >1jy3N (N:)
sacketgwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslfnyqk

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy3N (N:)
gwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslfn

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1jy3O (O:)
kverkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsvsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy3O (O:)
rkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsv

  • Chain 'P':
    Sequence, based on SEQRES records: (download) 
    >1jy3P (P:)
yvatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy3P (P:)
vatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegil

  • Chain 'Q':
    Sequence, based on SEQRES records: (download) 
    >1jy3Q (Q:)
sacketgwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslfnyqk

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy3Q (Q:)
gwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslfn

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >1jy3R (R:)
kverkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsvsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy3R (R:)
rkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsv

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >1jy3S (S:)
yvatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy3S (S:)
vatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily