PDB entry 1jy2

View 1jy2 on RCSB PDB site
Description: Crystal Structure of the Central Region of Bovine Fibrinogen (E5 fragment) at 1.4 Angstroms Resolution
Class: blood clotting
Keywords: fibrinogen, fragment E, disulfide bonds, asymmetry, coiled-coil, beta-sheet, crystal structure
Deposited on 2001-09-10, released 2001-10-17
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.216
AEROSPACI score: 0.78 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'N':
    Compound: fibrinogen alpha chain
    Species: BOS TAURUS
    Domains in SCOP 1.75: d1jy2n_
  • Chain 'O':
    Compound: fibrinogen beta chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy2o_
  • Chain 'P':
    Compound: fibrinogen gamma-b chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy2p_
  • Chain 'Q':
    Compound: fibrinogen alpha chain
    Species: BOS TAURUS
    Domains in SCOP 1.75: d1jy2q_
  • Chain 'R':
    Compound: fibrinogen beta chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy2r_
  • Chain 'S':
    Compound: fibrinogen gamma-b chain
    Species: BOS TAURUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1jy2s_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >1jy2N (N:)
sacketgwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslfnyqk

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy2N (N:)
gwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslf

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1jy2O (O:)
kverkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsvsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy2O (O:)
rkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsv

  • Chain 'P':
    Sequence, based on SEQRES records: (download) 
    >1jy2P (P:)
yvatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy2P (P:)
rdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily

  • Chain 'Q':
    Sequence, based on SEQRES records: (download) 
    >1jy2Q (Q:)
sacketgwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslfnyqk

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy2Q (Q:)
gwpfcsdedwntkcpsgcrmkglidevdqdftsrinklrdslf

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >1jy2R (R:)
kverkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvdsvsr

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy2R (R:)
rkppdadgclhadpdlgvlcptgcklqdtlvrqerpirksiedlrntvds

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >1jy2S (S:)
yvatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily

    Sequence, based on observed residues (ATOM records): (download) 
    >1jy2S (S:)
vatrdnccilderfgsycpttcgiadflnnyqtsvdkdlrtlegily