PDB entry 1jac

View 1jac on RCSB PDB site
Description: a novel mode of carbohydrate recognition in jacalin, a moraceae plant lectin with a beta-prism
Class: lectin
Keywords: non-legume, lectin, beta-prism fold, carbohydrate specificity, glycoprotein
Deposited on 1996-05-22, released 1997-06-05
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: 0.174
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.5
  • Chain 'B':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.5
  • Chain 'C':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.6
  • Chain 'D':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.6
  • Chain 'E':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.7
  • Chain 'F':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.7
  • Chain 'G':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.8
  • Chain 'H':
    Compound: jacalin
    Species: Artocarpus heterophyllus [TaxId:3489]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1jac.8
  • Heterogens: AMG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jacA (A:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jacB (B:)
neqsgksqtvivgswgakvs

    Sequence, based on observed residues (ATOM records): (download) 
    >1jacB (B:)
sgksqtvivgswgak

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jacC (C:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1jacD (D:)
neqsgksqtvivgswgakvs

    Sequence, based on observed residues (ATOM records): (download) 
    >1jacD (D:)
sgksqtvivgswgak

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jacE (E:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1jacF (F:)
neqsgksqtvivgswgakvs

    Sequence, based on observed residues (ATOM records): (download) 
    >1jacF (F:)
sgksqtvivgswgak

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jacG (G:)
gkafddgaftgireinlsynketaigdfqvvydlngspyvgqnhksfitgftpvkisldf
pseyimevsgytgnvsgyvvvrsltfktnkktygpygvtsgtpfnlpienglivgfkgsi
gywldyfsmylsl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1jacH (H:)
neqsgksqtvivgswgakvs

    Sequence, based on observed residues (ATOM records): (download) 
    >1jacH (H:)
sgksqtvivgswgak