PDB entry 1hbx

View 1hbx on RCSB PDB site
Description: ternary complex of sap-1 and srf with specific sre DNA
Class: gene regulation/DNA
Keywords: gene regulation, transcription complex, serum response factor, ternary complex factor
Deposited on 2001-04-20, released 2001-06-27
The last revision prior to the SCOP 1.73 freeze date was dated 2001-06-27, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3.15 Å
R-factor: 0.252
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: serum response factor
    Species: HOMO SAPIENS
    Gene: SRF (132-223)
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hbxa_
  • Chain 'B':
    Compound: serum response factor
    Species: HOMO SAPIENS
    Gene: SRF (132-223)
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hbxb_
  • Chain 'C':
    Compound: 5'-d(*gp*ap*tp*gp*gp*cp*cp*tp*ap*ap*tp*tp*ap* gp*gp*ap*cp*tp*tp*cp*cp*gp*gp*tp*g)-3'
  • Chain 'D':
    Compound: serum response factor
    Species: HOMO SAPIENS
    Gene: SRF (132-223)
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hbxd_
  • Chain 'E':
    Compound: serum response factor
    Species: HOMO SAPIENS
    Gene: SRF (132-223)
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hbxe_
  • Chain 'F':
    Compound: 5'-d(*gp*ap*tp*gp*gp*cp*cp*tp*ap*ap*tp*tp*ap* gp*gp*ap*cp*tp*tp*cp*cp*gp*gp*tp*g)-3'
  • Chain 'G':
    Compound: ets-domain protein elk-4
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hbxg_
  • Chain 'H':
    Compound: ets-domain protein elk-4
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hbxh_
  • Chain 'W':
    Compound: 5'-d(*cp*ap*cp*ap*cp*cp*gp*gp*ap*ap*gp*tp*cp* cp*tp*ap*ap*tp*tp*ap*gp*gp*cp*cp*ap*t)-3'
  • Chain 'X':
    Compound: 5'-d(*cp*ap*cp*ap*cp*cp*gp*gp*ap*ap*gp*tp*cp* cp*tp*ap*ap*tp*tp*ap*gp*gp*cp*cp*ap*t)-3'

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1hbxA (A:)
sgakpgkktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvaset
ghvytfatrklqpmitsetgkaliqtclnspd

    Sequence, based on observed residues (ATOM records): (download) 
    >1hbxA (A:)
gkktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvasetghvyt
fatrklqpmitsetgkaliqtclnspd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1hbxB (B:)
sgakpgkktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvaset
ghvytfatrklqpmitsetgkaliqtclnspd

    Sequence, based on observed residues (ATOM records): (download) 
    >1hbxB (B:)
kktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvasetghvytf
atrklqpmitsetgkaliqtclnspd

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1hbxD (D:)
sgakpgkktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvaset
ghvytfatrklqpmitsetgkaliqtclnspd

    Sequence, based on observed residues (ATOM records): (download) 
    >1hbxD (D:)
kktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvasetghvytf
atrklqpmitsetgkaliqtclnspd

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1hbxE (E:)
sgakpgkktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvaset
ghvytfatrklqpmitsetgkaliqtclnspd

    Sequence, based on observed residues (ATOM records): (download) 
    >1hbxE (E:)
kpgkktrgrvkikmefidnklrryttfskrktgimkkayelstltgtqvlllvasetghv
ytfatrklqpmitsetgkaliqtclnspd

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1hbxG (G:)
gsdsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydkl
sralryyyvkniikkvngqkfvykfvsypeilnmdpmtvgriegdceslnfsevsssskd
venggkdkppqpgaktssrndyihsglyssftlnsln

    Sequence, based on observed residues (ATOM records): (download) 
    >1hbxG (G:)
dsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydklsr
alryyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlnsln

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1hbxH (H:)
gsdsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydkl
sralryyyvkniikkvngqkfvykfvsypeilnmdpmtvgriegdceslnfsevsssskd
venggkdkppqpgaktssrndyihsglyssftlnsln

    Sequence, based on observed residues (ATOM records): (download) 
    >1hbxH (H:)
saitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydklsra
lryyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlns

  • Chain 'W':
    No sequence available.

  • Chain 'X':
    No sequence available.