PDB entry 1h8a

View 1h8a on RCSB PDB site
Description: crystal structure of ternary protein-DNA complex3
Class: transcription/DNA
Keywords: transcription/DNA, protein-DNA complex, transcription regulation, bzip, v-myb, c-myb, amv, c/ebp, crystal structure, avian myeloblastosis virus, transforming protein
Deposited on 2001-01-31, released 2002-01-28
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.23 Å
R-factor: 0.245
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: caat/enhancer binding protein beta
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1h8aa_
  • Chain 'B':
    Compound: caat/enhancer binding protein beta
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1h8ab_
  • Chain 'C':
    Compound: myb transforming protein
    Species: AVIAN MYELOBLASTOSIS VIRUS [TaxId:11866]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1h8ac1, d1h8ac2
  • Chain 'D':
    Compound: DNA(5'-(*gp*ap*tp*gp*tp*gp*gp*cp*gp*cp*ap* ap*tp*cp*cp*tp*tp*ap*ap*cp*gp*gp*ap*cp*tp*g)-3')
  • Chain 'E':
    Compound: DNA(5'-(*cp*cp*ap*gp*tp*cp*cp*gp*tp*tp*ap* ap*gp*gp*ap*tp*tp*gp*cp*gp*cp*cp*ap*cp*ap*t)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1h8aA (A:)
vkskakktvdkhsdeykirrernniavrksrdkakmrnletqhkvleltaenerlqkkve
qlsrelstlrnlfkqlpe

    Sequence, based on observed residues (ATOM records): (download) 
    >1h8aA (A:)
vdkhsdeykirrernniavrksrdkakmrnletqhkvleltaenerlqkkveqlsrelst
lrnlfkql

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1h8aB (B:)
vkskakktvdkhsdeykirrernniavrksrdkakmrnletqhkvleltaenerlqkkve
qlsrelstlrnlfkqlpe

    Sequence, based on observed residues (ATOM records): (download) 
    >1h8aB (B:)
dkhsdeykirrernniavrksrdkakmrnletqhkvleltaenerlqkkveqlsrelstl
rnlfkql

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1h8aC (C:)
meaviknrtdvqcqhrwqkvlnpelnkgpwtkeedqrviehvqkygpkrwsdiakhlkgr
igkqcrerwhnhlnpevkktswteeedriiyqahkrlgnrwaeiakllpgrtdnavknhw
nstmrrkv

    Sequence, based on observed residues (ATOM records): (download) 
    >1h8aC (C:)
npelnkgpwtkeedqrviehvqkygpkrwsdiakhlkgrigkqcrerwhnhlnpevkkts
wteeedriiyqahkrlgnrwaeiakllpgrtdnavknhwnstmrr

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.