PDB entry 1h29

View 1h29 on RCSB PDB site
Description: Sulfate respiration in Desulfovibrio vulgaris Hildenborough: Structure of the 16-heme Cytochrome c HmcA at 2.5 A resolution and a view of its role in transmembrane electron transfer
Class: electron transport
Keywords: electron transport, high molecular mass cytochrome, sulfate respiration, hydrogen cycle, transmembrane redox complex, energy conservation, proton gradient, tetra-heme, c3-like domain
Deposited on 2002-08-01, released 2002-10-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-08-30, with a file datestamp of 2017-08-25.
Experiment type: XRAY
Resolution: 2.51 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: high-molecular-weight cytochrome c
    Species: DESULFOVIBRIO VULGARIS [TaxId:882]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1h29a_
  • Chain 'B':
    Compound: high-molecular-weight cytochrome c
    Species: DESULFOVIBRIO VULGARIS [TaxId:882]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1h29b_
  • Chain 'C':
    Compound: high-molecular-weight cytochrome c
    Species: DESULFOVIBRIO VULGARIS [TaxId:882]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1h29c_
  • Chain 'D':
    Compound: high-molecular-weight cytochrome c
    Species: DESULFOVIBRIO VULGARIS [TaxId:882]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1h29d_
  • Heterogens: HEC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1h29A (A:)
kalpegpgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkm
slkfmrlddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswke
igfdkslhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpv
dkrpaldtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpd
aalilpvpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtads
kfvqlekamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdak
qveagallnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrk
ivktliagigedklaatfhiekgtlcqgchhnspasltppkcaschgkpfdadrgdrpgl
kaayhqqcmgchdrmkiekpantacvdchkerak

    Sequence, based on observed residues (ATOM records): (download) 
    >1h29A (A:)
pgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkmslkfmr
lddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswkeigfdks
lhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpvdkrpal
dtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpdaalilp
vpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtadskfvqle
kamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdakqveaga
llnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrkivktli
agigedklaatfhiekgtlcqgchhnspasltppkcaschgkrgdrpglkaayhqqcmgc
hdrmkiekpantacvdchker

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1h29B (B:)
kalpegpgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkm
slkfmrlddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswke
igfdkslhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpv
dkrpaldtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpd
aalilpvpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtads
kfvqlekamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdak
qveagallnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrk
ivktliagigedklaatfhiekgtlcqgchhnspasltppkcaschgkpfdadrgdrpgl
kaayhqqcmgchdrmkiekpantacvdchkerak

    Sequence, based on observed residues (ATOM records): (download) 
    >1h29B (B:)
pgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkmslkfmr
lddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswkeigfdks
lhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpvdkrpal
dtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpdaalilp
vpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtadskfvqle
kamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdakqveaga
llnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrkivktli
agigedklaatfhiekgtlcqgchhnspasltppkcaschgkrgdrpglkaayhqqcmgc
hdrmkiekpantacvdchk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1h29C (C:)
kalpegpgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkm
slkfmrlddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswke
igfdkslhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpv
dkrpaldtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpd
aalilpvpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtads
kfvqlekamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdak
qveagallnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrk
ivktliagigedklaatfhiekgtlcqgchhnspasltppkcaschgkpfdadrgdrpgl
kaayhqqcmgchdrmkiekpantacvdchkerak

    Sequence, based on observed residues (ATOM records): (download) 
    >1h29C (C:)
pgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkmslkfmr
lddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswkeigfdks
lhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpvdkrpal
dtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpdaalilp
vpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtadskfvqle
kamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdakqveaga
llnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrkivktli
agigedklaatfhiekgtlcqgchhnspasltppkcaschgkgdrpglkaayhqqcmgch
drmkiekpantacvdchkera

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1h29D (D:)
kalpegpgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkm
slkfmrlddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswke
igfdkslhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpv
dkrpaldtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpd
aalilpvpgkdapremkgtmkpvafdhkaheakandcrtchhvridtctachtvngtads
kfvqlekamhqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdak
qveagallnlkaeqrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrk
ivktliagigedklaatfhiekgtlcqgchhnspasltppkcaschgkpfdadrgdrpgl
kaayhqqcmgchdrmkiekpantacvdchkerak

    Sequence, based on observed residues (ATOM records): (download) 
    >1h29D (D:)
pgekradlieigamerfgkldlpkvafrhdqhttavtgmgkdcaachkskdgkmslkfmr
lddnsaaelkeiyhancigchtdlakagkktgpqdgecrschnpkpsaasswkeigfdks
lhyrhvaskaikpvgdpqkncgachhvydeaskklvwgknkedscrachgekpvdkrpal
dtaahtacischmdvaktkaetgpvncagchapeaqakfkvvrevprldrgqpdaalilp
vpgkdemkgtmkpvafdhkaheakandcrtchhvridtctachtvngtadskfvqlekam
hqpdsmrscvgchntrvqqptcagchgfikptksdaqcgvchvaapgfdakqvllnlkae
qrsqvaasmlsarpqpkgtfdlndipekvvigsiakeyqpsefphrkivktliagigedk
laatfhiekgtlcqgchhnspasltppkcaschgkgdrpglkaayhqqcmgchdrmkiek
pantacvdchke