PDB entry 1gw8

View 1gw8 on RCSB PDB site
Description: quasi-atomic resolution model of bacteriophage PRD1 sus607 mutant, obtained by combined cryo-EM and X-ray crystallography.
Class: virus/viral protein
Keywords: VIRUS/VIRAL PROTEIN, TECTIVIRIDAE, BACTERIOPHAGE PRD1, CRYO- EM, IMAGE RECONSTRUCTION, ICOSAHEDRAL VIRUS, VIRUS-VIRAL PROTEIN complex
Deposited on 2002-03-08, released 2002-03-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: EM
Resolution: 13.3 Å
R-factor: N/A
AEROSPACI score: -0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8a_
  • Chain 'B':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8b_
  • Chain 'C':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8c_
  • Chain 'D':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8d_
  • Chain 'E':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8e_
  • Chain 'F':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8f_
  • Chain 'G':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8g_
  • Chain 'H':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8h_
  • Chain 'I':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8i_
  • Chain 'J':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8j_
  • Chain 'K':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8k_
  • Chain 'L':
    Compound: Major capsid protein
    Species: BACTERIOPHAGE PRD1 [TaxId:10658]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gw8l_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1gw8A (A:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8A (A:)
alrnqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvta
aitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssmv
tdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlkl
efannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplidl
stlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanfs
dtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarll
mgyeyftsrte

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1gw8B (B:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8B (B:)
aalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkv
taaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflss
mvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrl
klefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilpli
dlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtan
fsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnar
llmgyeyftsrte

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1gw8C (C:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8C (C:)
alrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvt
aaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssm
vtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlk
lefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplid
lstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanf
sdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarl
lmgyeyftsrte

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1gw8D (D:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8D (D:)
alrnqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvta
aitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssmv
tdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlkl
efannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplidl
stlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanfs
dtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarll
mgyeyftsrte

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1gw8E (E:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8E (E:)
aalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkv
taaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflss
mvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrl
klefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilpli
dlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtan
fsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnar
llmgyeyftsrte

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1gw8F (F:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8F (F:)
alrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvt
aaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssm
vtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlk
lefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplid
lstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanf
sdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarl
lmgyeyftsrte

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1gw8G (G:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8G (G:)
alrnqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvta
aitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssmv
tdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlkl
efannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplidl
stlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanfs
dtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarll
mgyeyftsrte

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1gw8H (H:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8H (H:)
aalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkv
taaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflss
mvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrl
klefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilpli
dlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtan
fsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnar
llmgyeyftsrte

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1gw8I (I:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8I (I:)
alrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvt
aaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssm
vtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlk
lefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplid
lstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanf
sdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarl
lmgyeyftsrte

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1gw8J (J:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8J (J:)
alrnqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvta
aitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssmv
tdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlkl
efannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplidl
stlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanfs
dtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarll
mgyeyftsrte

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1gw8K (K:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8K (K:)
aalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkv
taaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflss
mvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrl
klefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilpli
dlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtan
fsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnar
llmgyeyftsrte

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1gw8L (L:)
aqvqqltpaqqaalrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpan
vgivkgflvkvtaaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvn
takqgapflssmvtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgav
lanvpqskqrlklefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlp
vgqngyilplidlstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagt
dinylsqrtanfsdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfv
vnpktvnqnarllmgyeyftsrtelvnagtistt

    Sequence, based on observed residues (ATOM records): (download) 
    >1gw8L (L:)
alrnqqamaanlqarqivlqqsypviqqvetqtfdpanrsvfdvtpanvgivkgflvkvt
aaitnnhateavaltdfgpanlvqrviyydpdnqrhtetsgwhlhfvntakqgapflssm
vtdspikygdvmnvidapatiaagatgeltmyywvplaysetdltgavlanvpqskqrlk
lefannntafaavganpleaiyqgagaadcefeeisytvyqsyldqlpvgqngyilplid
lstlynlensaqagltpnvdfvvqyanlyrylstiavfdnggsfnagtdinylsqrtanf
sdtrkldpktwaaqtrrriatdfpkgvyycdnrdkpiytlqygnvgfvvnpktvnqnarl
lmgyeyftsrte