PDB entry 1gm5

View 1gm5 on RCSB PDB site
Description: structure of recg bound to three-way DNA junction
Class: helicase
Keywords: helicase, replication restart
Deposited on 2001-09-11, released 2001-10-03
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.24 Å
R-factor: 0.275
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: recg
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1gm5a1, d1gm5a2, d1gm5a3, d1gm5a4
  • Chain 'X':
    Compound: DNA (5'-(*cp*ap*gp*cp*tp*cp*cp*ap*tp*gp*ap*tp* cp*ap*tp*tp*gp*gp*cp*a)-3')
  • Chain 'Y':
    Compound: DNA (5'-(*gp*cp*ap*gp*tp*gp*cp*tp*cp*gp*cp*ap* tp*gp*gp*ap*gp*cp*tp*g)-3')
  • Chain 'Z':
    Compound: DNA (5'-(*gp*ap*gp*cp*ap*cp*tp*gp*c)-3')
  • Heterogens: ADP, MG

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1gm5A (A:)
mlcsryftsslflwgealptlleeflnevekmlknqvntrrihqllkelddpllenkdle
eklqafldyvkeipnlpearkryriqkslemieklrswflidylecsgeevdlstdiqya
kgvgpnrkkklkklgietlrdlleffprdyedrrkifklndllpgekvttqgkivsvetk
kfqnmniltavlsdglvhvplkwfnqdylqtylkqltgkevfvtgtvksnaytgqyeihn
aevtpkegeyvrrilpiyrltsgisqkqmrkifeenipslccslketlperilekrkllg
vkdayygmhfpktfyhlekarerlayeelfvlqlafqkirkerekhggipkkiegklaee
fikslpfkltnaqkrahqeirndmisekpmnrllqgdvgsgktvvaqlaildnyeagfqt
afmvptsilaiqhyrrtvesfskfnihvalligattpsekekiksglrngqidvvigtha
liqedvhfknlglviideqhrfgvkqrealmnkgkmvdtlvmsatpiprsmalafygdld
vtvidemppgrkevqtmlvpmdrvnevyefvrqevmrggqafivyplieesdklnvksav
emyeylskevfpefklglmhgrlsqeekdrvmlefaegrydilvsttvievgidvpranv
mvienperfglaqlhqlrgrvgrggqeaycflvvgdvgeeamerlrfftlntdgfkiaey
dlktrgpgeffgvkqhglsgfkvadlyrdlkllewaredvqeidvegielpeeiklievg

    Sequence, based on observed residues (ATOM records): (download) 
    >1gm5A (A:)
ftsslflwgealptlleeflnevekmlknqvntrrihqllkelddpllenkdleeklqaf
ldyvkeipnlpearkryriqkslemieklrswflidylecsgeevdlstdiqyakgvgpn
rkkklkklgietlrdlleffprdyedrrkifklndllpgekvttqgkivsvetkkfqnmn
iltavlsdglvhvplkwfnqdylqtylkqltgkevfvtgtvksnaytgqyeihnaevtpk
egeyvrrilpiyrltsgisqkqmrkifeenipslccslketlperilekrkllgvkdayy
gmhfpktfyhlekarerlayeelfvlqlafqkirkerekhggipkkiegklaeefikslp
fkltnaqkrahqeirndmisekpmnrllqgdvgsgktvvaqlaildnyeagfqtafmvpt
silaiqhyrrtvesfskfnihvalligattpsekekiksglrngqidvvigthaliqedv
hfknlglviideqhrfealmnkgkmvdtlvmsatpiprsmalafygdldvtvidemppgr
kevqtmlvpmdrvnevyefvrqevmrggqafivypliksavemyeylskevfklglmhgr
lsqeekdrvmlefaegrydilvsttvievgidvpranvmvienperfglaqlhqlrgrvg
rggqeaycflvvgdvgeeamerlrfftlntdgfkiaeydlktrgpgekqhglsgfkvadl
yrdlkllew

  • Chain 'X':
    No sequence available.

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.