SCOPe 2.04: Structural Classification of Proteins

PDB entry 1emc

View 1emc on RCSB PDB site
Description: green fluorescent protein from aequorea victoria, mutant
Class: luminescence
Keywords: fluorescent protein, beta-barrel, bioluminescence, luminescence
Deposited on 1997-03-31, released 1997-08-20
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-05-12, with a file datestamp of 2009-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.205
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - engineered (64)
  - chromophore (66)
  - conflict (80)
  - engineered (167)
Domains in SCOPe 2.04: d1emca_
Chain 'B':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - engineered (64)
  - chromophore (66)
  - conflict (80)
  - engineered (167)
Domains in SCOPe 2.04: d1emcb_
Chain 'C':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - engineered (64)
  - chromophore (66)
  - conflict (80)
  - engineered (167)
Domains in SCOPe 2.04: d1emcc_
Chain 'D':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - engineered (64)
  - chromophore (66)
  - conflict (80)
  - engineered (167)
Domains in SCOPe 2.04: d1emcd_
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1emcA (A:)
maskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttlsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqla
dhyqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagithgmdelyn

Sequence, based on observed residues (ATOM records): (download)

>1emcA (A:)
geelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvtt
lsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtlvnri
elkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqladhyq
qntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagit

Chain 'B':
Sequence, based on SEQRES records: (download)

>1emcB (B:)
maskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttlsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqla
dhyqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagithgmdelyn

Sequence, based on observed residues (ATOM records): (download)

>1emcB (B:)
geelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvtt
lsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtlvnri
elkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqladhyq
qntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagit

Chain 'C':
Sequence, based on SEQRES records: (download)

>1emcC (C:)
maskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttlsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqla
dhyqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagithgmdelyn

Sequence, based on observed residues (ATOM records): (download)

>1emcC (C:)
geelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvtt
lsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtlvnri
elkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqladhyq
qntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagith

Chain 'D':
Sequence, based on SEQRES records: (download)

>1emcD (D:)
maskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttlsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqla
dhyqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagithgmdelyn

Sequence, based on observed residues (ATOM records): (download)

>1emcD (D:)
geelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvtt
lsygvqcfsrypdhmkrhdffksampegyvqertiffkddgnyktraevkfegdtlvnri
elkgidfkedgnilghkleynynshnvyimadkqkngikvnfktrhniedgsvqladhyq
qntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagit