PDB entry 1e3h
View 1e3h on RCSB PDB site
Description: semet derivative of streptomyces antibioticus pnpase/gpsi enzyme
Class: polyribonucleotide transferase
Keywords: polyribonucleotide transferase, ATP:GTP diphosphotransferase, RNA processing, RNA degradation
Deposited on
2000-06-15, released
2000-11-05
The last revision prior to the SCOP 1.73 freeze date was dated
2000-11-05, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.201
AEROSPACI score: -1.69
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: guanosine pentaphosphate synthetase
Species: Streptomyces antibioticus
Gene: GPSI
Database cross-references and differences (RAF-indexed):
- Uniprot Q53597
- modified residue (62)
- conflict (68)
- modified residue (90)
- modified residue (141)
- modified residue (200)
- modified residue (215-216)
- conflict (223)
- conflict (227)
- conflict (230-231)
- conflict (257)
- conflict (275)
- sequencing ambiguity (279)
- conflict (288-289)
- conflict (292)
- conflict (296-297)
- conflict (306)
- conflict (316)
- sequencing ambiguity (351)
- modified residue (398)
- modified residue (401)
- modified residue (417)
- modified residue (480)
- modified residue (488)
- modified residue (506)
- modified residue (535)
- modified residue (581-582)
- conflict (591)
- conflict (629)
- conflict (644)
- conflict (646-647)
Domains in SCOP 1.73: d1e3ha1, d1e3ha2, d1e3ha3, d1e3ha4, d1e3ha5, d1e3ha6 - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1e3hA (A:)
asmtggqqmgrgsgsefmenethyaeavidngafgtrtirfetgrlarqaagsavayldd
dtmvlsattasknpkdqldffpltvdveermyaagkipgsffrregrpsedailtcrlid
rplrpsfkkglrneiqvvatimalnpdhlydvvainaasastqlaglpfsgpiggvrval
irgqwvafpthteledavfdmvvagrvledgdvaimmveaeatektiqlvkdgaeaptee
vvaagldaakpfikvlckaqadlaakaakptgefpvfldyqddvlealsaavrpelsaal
tiagkqdreaeldrvkalaaekllpefegrekeisaayraltkslvrerviaekkridgr
gvtdirtlaaeveaiprvhgsalfergetqilgvttlnmlrmeqqldtlspvtrkrymhn
ynfppysvgetgrvgspkrreighgalaeraivpvlptreefpyairqvsealgsngsts
mgsvcastmsllnagvplkapvagiamglisqeingethyvaltdilgaedafgdmdfkv
agtkefvtalqldtkldgipasvlaaalkqardarlhildvmmeaidtpdemspnaprii
tvkipvdkigevigpkrqminqiqedtgaeitieddgtiyigaadgpaaeaaratingia
nptspevgerilgsvvktttfgafvsllpgkdgllhisqirklaggkrvenvedvlgvgq
kvqveiaeidsrgklslipviegeeaasdekkddaeq
Sequence, based on observed residues (ATOM records): (download)
>1e3hA (A:)
nethyaeavidngafgtrtirfetgrlarqaagsavayldddtmvlsattasknpkdqld
ffpltvdveermyaagkipgsffrregrpsedailtcrlidrplrpsfkkglrneiqvva
timalnpdhlydvvainaasastqlaglpfsgpiggvrvalirgqwvafpthteledavf
dmvvagrvledgdvaimmveaeatektiqlvkdgaeapteevvaagldaakpfikvlcka
qadlaakaakptgefpvfldyqddvlealsaavrpelsaaltiagkqdreaeldrvkala
aekllpefegrekeisaayraltkslvrerviaekkridgrgvtdirtlaaeveaiprvh
gsalfergetqilgvttlnmlrmeqqldtlspvtrkrymhnynfppysvgetgrvgspkr
reighgalaeraivpvlptreefpyairqvsealgsngstsmgsvcastmsllnagvplk
apvagiamglisqeingethyvaltdilgaedafgdmdfkvagtkefvtalqldtkldgi
pasvlaaalkqardarlhildvmmeaidtpdemspnapriiqiqedtgaeiyigaadgpa
a