PDB entry 1d0s

View 1d0s on RCSB PDB site
Description: crystal structure of nicotinate mononucleotide : 5,6-dimethylbenzimidazole phosphoribosyltransferase (cobt) from salmonella typhimurium complexed with 5, 6-dimethylbenzimidazole
Class: transferase
Keywords: dinucleotide-binding motif, phosphoribosyl transferase, transferase
Deposited on 1999-09-14, released 1999-12-29
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.172
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase
    Species: Salmonella typhimurium [TaxId:602]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q05603
      • see remark 999 (157)
    Domains in SCOPe 2.02: d1d0sa_
  • Heterogens: PO4, DMD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1d0sA (A:)
mqtlhallrdipapdaeamartqqhidgllkppgslgrletlavqlagmpglngtpqvge
kavlvmcadhgvwdegvavspkivtaiqaanmtrgttgvcvlaaqagakvhvidvgidae
pipgvvnmrvargcgniavgpamsrlqaealllevsryacdlaqrgvtlfgvgelgmant
tpaaamvsvftgsdakevvgiganlppsridnkvdvvrraiainqpnprdgidvlskvgg
fdlvgmtgvmlgaarcglpvlldgflsysaalaacqiapavrpylipshfsaekgarial
ahlsmepylhmamrlgegsgaalampiveaacamfhnmgelaasnivlpegnanat

    Sequence, based on observed residues (ATOM records): (download) 
    >1d0sA (A:)
lhallrdipapdaeamartqqhidgllkppgslgrletlavqlagmpglngtpqvgekav
lvmcadhgvwdegvavspkivtaiqaanmtrgttgvcvlaaqagakvhvidvgidaepip
gvvnmrvargcgniavgpamsrlqaealllevsryacdlaqrgvtlfgvgelgmanttpa
aamvsvftgsdakevvgiganlppsridnkvdvvrraiainqpnprdgidvlskvggfdl
vgmtgvmlgaarcglpvlldgflsysaalaacqiapavrpylipshfsaekgarialahl
smepylhmamrlgegsgaalampiveaacamfhnmgelaasnivlp