PDB entry 1akh
View 1akh on RCSB PDB site
Description: mat a1/alpha2/DNA ternary complex
Class: DNA binding protein/DNA
Keywords: complex (two DNA-binding proteins/DNA), complex, DNA-binding protein, DNA, transcription regulation, DNA binding protein/DNA complex
Deposited on
1997-05-19, released
1998-05-20
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.201
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (mating-type protein a-1)
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: MAT A1 RESIDUES 66 - 126
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1akha_ - Chain 'B':
Compound: protein (mating-type protein alpha-2)
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: MAT ALPHA2 RESIDUES 128 - 210
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1akhb_ - Chain 'C':
Compound: DNA (5'-d(*tp*ap*cp*ap*tp*gp*tp*ap*ap*ap*ap*ap*tp*tp*tp*ap*c p*ap*tp*cp*a)-3')
- Chain 'D':
Compound: DNA (5'-d(*tp*ap*tp*gp*ap*tp*gp*tp*ap*ap*ap*tp*tp*tp*tp*tp*a p*cp*ap*tp*g)-3')
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1akhA (A:)
kkekspkgkssispqarafleevfrrkqslnskekeevakkcgitplqvrvwfinkrmrs
k
Sequence, based on observed residues (ATOM records): (download)
>1akhA (A:)
ispqarafleevfrrkqslnskekeevakkcgitplqvrvwfinkrmrs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1akhB (B:)
tkpyrghrftkenvrileswfaknienpyldtkglenlmkntslsriqiknwvsnrrrke
ktitiapeladllsgeplakkke
Sequence, based on observed residues (ATOM records): (download)
>1akhB (B:)
tkpyrghrftkenvrileswfaknienpyldtkglenlmkntslsriqiknwvsnrrrke
ktitiapeladllsgepl
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.