SCOPe 2.06: Domain d1ur8b2: 1ur8 B:3-291,B:380-446

Lineage for d1ur8b2 (1ur8 B:3-291,B:380-446)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.5: Type II chitinase [51534] (15 proteins)
   glycosylase family 18

6. Protein Chitinase B, catalytic domain [51546] (1 species)

7. Species Serratia marcescens [TaxId:615] [51547] (18 PDB entries)

8. Domain d1ur8b2: 1ur8 B:3-291,B:380-446 [99817]
   Other proteins in same PDB: d1ur8a1, d1ur8a3, d1ur8b1, d1ur8b3
   complexed with gdl, gol, nag, so4

Details for d1ur8b2

PDB Entry: 1ur8, 1.9 Å

PDB Description: interactions of a family 18 chitinase with the designed inhibitor hm508, and its degradation product, chitobiono-delta-lactone

PDB Compounds: (B:) chitinase b

SCOPe Domain Sequences for d1ur8b2:

Sequence; same for both SEQRES and ATOM records:

>d1ur8b2 c.1.8.5 (B:3-291,B:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]}
trkavigyyfiptnqinnytetdtsvvpfpvsnitpakakqlthinfsfldinsnlecaw
dpatndakardvvnrltalkahnpslrimfsiggwyysndlgvshanyvnavktpasrak
faqscvrimkdygfdgvdidweypqaaevdgfiaalqeirtllnqqtitdgrqalpyqlt
iagaggafflsryysklaqivapldyinlmtydlagpwekvtnhqaalfgdaagptfyna
lreanlgwsweeltrafpspfsltvdaavqqhlmmegvpsakivmgvpfXddaesfkyka
kyikqqqlggvmfwhlgqdnrngdllaaldryfnaadyddsqldmgtglrytgvgpg

Timeline for d1ur8b2:

• d1ur8b2 first appeared in SCOP 1.67
  
• d1ur8b2 appears in SCOPe 2.05
  
• d1ur8b2 appears in SCOPe 2.07
  
• d1ur8b2 appears in the current release, SCOPe 2.08