SCOPe 2.05: Domain d1uh4a3: 1uh4 A:123-554

Lineage for d1uh4a3 (1uh4 A:123-554)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Maltogenic amylase, central domain [51465] (4 species)
   contains an additional N-terminal domain

7. Species Thermoactinomyces vulgaris, TVAI [TaxId:2026] [75061] (8 PDB entries)

8. Domain d1uh4a3: 1uh4 A:123-554 [99393]
   Other proteins in same PDB: d1uh4a1, d1uh4a2
   complexed with ca, glc, mpd

Details for d1uh4a3

PDB Entry: 1uh4, 1.8 Å

PDB Description: thermoactinomyces vulgaris r-47 alpha-amylase 1/malto-tridecaose complex

PDB Compounds: (A:) alpha-amylase I

SCOPe Domain Sequences for d1uh4a3:

Sequence; same for both SEQRES and ATOM records:

>d1uh4a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}
nfktpdwlkngvmyqifpdrfyngdssndvqtgsytyngtptekkawgssvyadpgydns
lvffggdlagidqklgyikktlganilylnpifkaptnhkydtqdymavdpafgdnstlq
tlindihstangpkgylildgvfnhtgdshpwfdkynnfssqgayesqsspwynyytfyt
wpdsyasflgfnslpklnygnsgsavrgviynnsnsvaktylnppysvdgwrlnaaqyvd
angnngsdvtnhqiwsefrnavkgvnsnaaiigqywgnanpwtaqgnqwdaatnfdgftq
pvsewitgkdyqnnsasisttqfdswlrgtranyptnvqqsmmnflsnhditrfatrsgg
dlwktylalifqmtyvgtptiyygdeygmqggadpdnrrsfdwsqatpsnsavaltqkli
tirnqypalrtg

Timeline for d1uh4a3:

• d1uh4a3 first appeared in SCOP 1.67
  
• d1uh4a3 appears in SCOPe 2.04
  
• d1uh4a3 appears in SCOPe 2.06
  
• d1uh4a3 appears in the current release, SCOPe 2.08