SCOP 1.75: Domain d1syta1: 1syt A:1-239,A:308-362

Lineage for d1syta1 (1syt A:1-239,A:308-362)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (14 families)

5. Family c.1.8.5: Type II chitinase [51534] (14 proteins)
   glycosylase family 18

6. Protein Signal processing protein (SPC-40, MGP-40) [89480] (5 species)
   secreted during involution

7. Species Goat (Capra hircus) [TaxId:9925] [89481] (14 PDB entries)

8. Domain d1syta1: 1syt A:1-239,A:308-362 [99040]
   Other proteins in same PDB: d1syta2
   complexed with man, nag

Details for d1syta1

PDB Entry: 1syt, 2.6 Å

PDB Description: crystal structure of signalling protein from goat spg-40 in the presense of n,n',n''-triacetyl-chitotriose at 2.6a resolution

PDB Compounds: (A:) bp40

SCOP Domain Sequences for d1syta1:

Sequence; same for both SEQRES and ATOM records:

>d1syta1 c.1.8.5 (A:1-239,A:308-362) Signal processing protein (SPC-40, MGP-40) {Goat (Capra hircus) [TaxId: 9925]}
yklicyytswsqyregdgscfpdaidpflcthviysfanisnneidtwewndvtlydtln
tlknrnpklktllsvggwnfgperfskiasktqsrrtfiksvppflrthgfdgldlawly
pgrrdkrhltalvkemkaefareaqagterlllsaavsagkiaidrgydiaqisrhldfi
slltydfhgawrqtvghhsplfrgnsdassrfsnadyavsymlrlgapanklvmgiptXd
dqesvknkarylknrqlagamvwaldlddfrgtfcgqnltfpltsavkdvlarv

Timeline for d1syta1:

• d1syta1 first appeared in SCOP 1.67
  
• d1syta1 appears in SCOP 1.73
  
• d1syta1 appears in SCOPe 2.01
  
• d1syta1 appears in the current release, SCOPe 2.08