Lineage for d1soji_ (1soj I:)

  1. Root: SCOP 1.67
  2. 349259Class a: All alpha proteins [46456] (202 folds)
  3. 360609Fold a.125: PDEase [48546] (1 superfamily)
    multihelical; can be divided into three subdomains
  4. 360610Superfamily a.125.1: PDEase [48547] (1 family) (S)
  5. 360611Family a.125.1.1: PDEase [48548] (4 proteins)
    3',5'-cyclic-nucleotide phosphodiesterase, Pfam 00233
  6. 360646Protein cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b [101441] (1 species)
  7. 360647Species Human (Homo sapiens) [TaxId:9606] [101442] (2 PDB entries)
  8. 360660Domain d1soji_: 1soj I: [98950]

Details for d1soji_

PDB Entry: 1soj (more details), 2.9 Å

PDB Description: catalytic domain of human phosphodiesterase 3b in complex with ibmx

SCOP Domain Sequences for d1soji_:

Sequence, based on SEQRES records: (download)

>d1soji_ a.125.1.1 (I:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens)}
ldlilveeydsliekmsnwnfpifelvekmgeksgrilsqvmytlfqdtglleifkiptq
qfmnyfralengyrdipyhnrihatdvlhavwylttrpvpglqqihngcgtgnetdsdgr
inhgriayisskscsnpdesygclssnipalelmalyvaaamhdydhpgrtnaflvatna
pqavlyndrsvlenhhaasawnlylsrpeynfllhldhvefkrfrflvieailatdlllh
fdflaefnakandvnsngiewsnendrllvcqvcikladingpakvrdlhlkwtegivne
fyeqgdeeanlglpispfmdrsspqlaklqesfithivgplcnsydaagllpgqwleaee
dndtesgddedgeeldtedeemennlnpkpprrksrrrifcqlmhhltenhkiwk

Sequence, based on observed residues (ATOM records): (download)

>d1soji_ a.125.1.1 (I:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens)}
ldlilveeydsliekmsnwnfpifelvekmgeksgrilsqvmytlfqdtglleifkiptq
qfmnyfralengyrdipyhnrihatdvlhavwylttrpvpglqqihngriayisskscsn
pdesygclssnipalelmalyvaaamhdydhpgrtnaflvatnapqavlyndrsvlenhh
aasawnlylsrpeynfllhldhvefkrfrflvieailatdlllhfdflaefnakandvns
ngiewsnendrllvcqvcikladingpakvrdlhlkwtegivnefyeqgdeeanlglpis
pfmdrsspqlaklqesfithivgplcnsydaagllpgqwleaesrrrifcqlmhhltenh
kiwk

SCOP Domain Coordinates for d1soji_:

Click to download the PDB-style file with coordinates for d1soji_.
(The format of our PDB-style files is described here.)

Timeline for d1soji_: