Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily) mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix |
Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) duplication: consists of two similar domain swapped with C-terminal strands |
Family d.21.1.2: PhzC/PhzF-like [89863] (4 proteins) Pfam PF02567 |
Protein Hypothetical protein YddE [89864] (1 species) |
Species Escherichia coli [TaxId:562] [89865] (4 PDB entries) Uniprot P37757 structural genomics; NESG target ET25 |
Domain d1sdja1: 1sdj A:1-129 [98807] Other proteins in same PDB: d1sdja3, d1sdja4 structural genomics; NESG target ET25 complexed with so4 |
PDB Entry: 1sdj (more details), 2.3 Å
SCOPe Domain Sequences for d1sdja1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1sdja1 d.21.1.2 (A:1-129) Hypothetical protein YddE {Escherichia coli [TaxId: 562]} mkpqvyhvdaftsqpfrgnsagvvfpadnlseaqmqliarelghsetafllhsddsdvri ryftptvevpicghatvaahyvrakvlglgnctiwqtslagkhrvtiekhnddyrisleq gtpgfeppl
Timeline for d1sdja1: