Lineage for d1rurh1 (1rur H:1-113)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652160Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 652563Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (148 PDB entries)
  8. 652568Domain d1rurh1: 1rur H:1-113 [97879]
    Other proteins in same PDB: d1rurh2, d1rurl1, d1rurl2
    part of Diels-Alder catalytic Fab 13G5
    complexed with zn

Details for d1rurh1

PDB Entry: 1rur (more details), 1.5 Å

PDB Description: crystal structure (i) of native diels-alder antibody 13g5 fab at ph 8.0 with a data set collected at ssrl beamline 9-1.
PDB Compounds: (H:) immunoglobulin 13G5, heavy chain

SCOP Domain Sequences for d1rurh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rurh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
evqleesgpelvrpgtsvkisckasgytftnywlgwvkqrpghgfewigdiypggvyttn
nekfrgkailtadtssstaymqlssltsedsavyfcaraggyytggdywgqgtsvtvss

SCOP Domain Coordinates for d1rurh1:

Click to download the PDB-style file with coordinates for d1rurh1.
(The format of our PDB-style files is described here.)

Timeline for d1rurh1:

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Domains from same chain:
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d1rurh2