Lineage for d1ru9h1 (1ru9 H:1-113)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 362617Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)
  6. 362751Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 363325Species Mouse (Mus musculus), cluster 7.1 [TaxId:10090] [88557] (33 PDB entries)
  8. 363338Domain d1ru9h1: 1ru9 H:1-113 [97851]
    Other proteins in same PDB: d1ru9h2, d1ru9l1, d1ru9l2
    part of cationic cyclization catalytic Fab 4C6
    complexed with 4ht, act, bez, ghg, gol

Details for d1ru9h1

PDB Entry: 1ru9 (more details), 2.5 Å

PDB Description: Crystal Structure (A) of u.v.-irradiated cationic cyclization antibody 4C6 Fab at pH 4.6 with a data set collected in-house.

SCOP Domain Sequences for d1ru9h1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ru9h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.1}

SCOP Domain Coordinates for d1ru9h1:

Click to download the PDB-style file with coordinates for d1ru9h1.
(The format of our PDB-style files is described here.)

Timeline for d1ru9h1:

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