Lineage for d1rk5a2 (1rk5 A:420-480)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2819141Fold b.92: Composite domain of metallo-dependent hydrolases [51337] (1 superfamily)
    pseudobarrel; mixed sheet of 7 strand folded upon itself and "buckled" by two beta-turns
  4. 2819142Superfamily b.92.1: Composite domain of metallo-dependent hydrolases [51338] (12 families) (S)
    this domain is interrupted by the catalytic beta/alpha barrel domain
  5. 2819301Family b.92.1.6: D-aminoacylase [82230] (1 protein)
  6. 2819302Protein N-acyl-D-aminoacid amidohydrolase [82231] (1 species)
  7. 2819303Species Alcaligenes faecalis [TaxId:511] [82232] (8 PDB entries)
  8. 2819313Domain d1rk5a2: 1rk5 A:420-480 [97597]
    Other proteins in same PDB: d1rk5a3
    complexed with act, cu, zn; mutant

Details for d1rk5a2

PDB Entry: 1rk5 (more details), 1.8 Å

PDB Description: the d-aminoacylase mutant d366a in complex with 100mm cucl2
PDB Compounds: (A:) D-aminoacylase

SCOPe Domain Sequences for d1rk5a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rk5a2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]}
qvqpgyyadlvvfdpatvadsatfehpteraagihsvyvngaavwedqsftgqhagrvln
r

SCOPe Domain Coordinates for d1rk5a2:

Click to download the PDB-style file with coordinates for d1rk5a2.
(The format of our PDB-style files is described here.)

Timeline for d1rk5a2: