Lineage for d1r5ub_ (1r5u B:)

  1. Root: SCOP 1.71
  2. 627044Class i: Low resolution protein structures [58117] (24 folds)
  3. 628488Fold i.8: RNA polymerase [58180] (1 superfamily)
  4. 628489Superfamily i.8.1: RNA polymerase [58181] (1 family) (S)
  5. 628490Family i.8.1.1: RNA polymerase [58182] (2 proteins)
  6. 628491Protein Complete 12-subunit RNA polymerase II complex [90261] (1 species)
  7. 628492Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [90262] (12 PDB entries)
  8. 628613Domain d1r5ub_: 1r5u B: [97106]

Details for d1r5ub_

PDB Entry: 1r5u (more details), 4.5 Å

PDB Description: rna polymerase ii tfiib complex

SCOP Domain Sequences for d1r5ub_:

Sequence, based on SEQRES records: (download)

>d1r5ub_ i.8.1.1 (B:) Complete 12-subunit RNA polymerase II complex {Baker's yeast (Saccharomyces cerevisiae)}
desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhtt
esdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyea
idvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdm
ggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvkly
gregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcve
dgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflg
yminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveea
hdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtn
tpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitfls
ewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdi
rekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveey
twssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattft
hceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyyp
qkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsy
mdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpis
pdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdk
fasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsg
negdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmv
ddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafr
vhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytd
rsrdf

Sequence, based on observed residues (ATOM records): (download)

>d1r5ub_ i.8.1.1 (B:) Complete 12-subunit RNA polymerase II complex {Baker's yeast (Saccharomyces cerevisiae)}
desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvt
kpmvnesdgvthalypqearlrnltyssglfvdvkkkvfigrlpimlrskncylseates
dlyklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekg
srfistlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvnd
wqmlemlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkaf
flgyminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtv
elainaktitsglkyalatgnwgagvsqvlnrytysstlshlrrtntpiakprqlhnthw
glvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqspdatr
vfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvyrplfi
veddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesiliamqpe
dlepaeadvdpakrirvshhattfthceihpsmilgvaasiipfpdhnqsprntyqsamg
kqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysgyn
qedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydkld
ddgliapgvrvsgedviigkttpisskrdastplrstengivdqvlvttnqdglkfvkvr
vrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahli
ecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiff
gptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasfl
kerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqel
mamnitprlytdrsrdf

SCOP Domain Coordinates for d1r5ub_:

Click to download the PDB-style file with coordinates for d1r5ub_.
(The format of our PDB-style files is described here.)

Timeline for d1r5ub_: