Lineage for d1q9rb1 (1q9r B:1-111)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 362617Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)
  6. 362751Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 362858Species Mouse (Mus musculus), cluster 1 [TaxId:10090] [88548] (41 PDB entries)
  8. 362860Domain d1q9rb1: 1q9r B:1-111 [96307]
    Other proteins in same PDB: d1q9ra1, d1q9ra2, d1q9rb2
    part of Fab s25-2
    complexed with kda, kdo, mg, zn

Details for d1q9rb1

PDB Entry: 1q9r (more details), 1.45 Å

PDB Description: S25-2- a(2-8)Kdo disaccharide complex

SCOP Domain Sequences for d1q9rb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q9rb1 b.1.1.1 (B:1-111) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1}

SCOP Domain Coordinates for d1q9rb1:

Click to download the PDB-style file with coordinates for d1q9rb1.
(The format of our PDB-style files is described here.)

Timeline for d1q9rb1:

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