Lineage for d1q9lc2 (1q9l C:108-213)

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1103261Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1103262Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1105902Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 1108335Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (4 species)
  7. 1108556Species Mouse (Mus musculus) [TaxId:10090] [88567] (317 PDB entries)
    Uniprot P01837# KAC_MOUSE Ig kappa chain C region; 99% sequence identity ! SQ NA # natural chimera; best hits are: Uniprot P01637 (Ig kappa chain V-V region T1) and Uniprot P01837 (Ig kappa chain C region) ! Uniprot P01837 # KAC_MOUSE Ig kappa chain C region ! Uniprot P01837 # KAC_MOUSE (P01837) Ig kappa chain C region ! SQ NA # part of Fab 28 against HIV-1 RT ! Uniprot P01837 # ! KAC_MOUSE Ig kappa chain C region
  8. 1108708Domain d1q9lc2: 1q9l C:108-213 [96285]
    Other proteins in same PDB: d1q9la1, d1q9lb1, d1q9lb2, d1q9lc1, d1q9ld1, d1q9ld2
    part of Fab s25-2
    complexed with mg, zn

Details for d1q9lc2

PDB Entry: 1q9l (more details), 2.28 Å

PDB Description: S25-2 Fab Unliganded 2
PDB Compounds: (C:) S25-2 Fab (IgG1k) light chain

SCOPe Domain Sequences for d1q9lc2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q9lc2 b.1.1.2 (C:108-213) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}
adaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqds
kdstysmsstltltkdeyerhnsytceathktstspivksfnrnec

SCOPe Domain Coordinates for d1q9lc2:

Click to download the PDB-style file with coordinates for d1q9lc2.
(The format of our PDB-style files is described here.)

Timeline for d1q9lc2: