Lineage for d1q9lc1 (1q9l C:1-107)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 362617Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)
  6. 363425Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 363702Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (34 PDB entries)
  8. 363728Domain d1q9lc1: 1q9l C:1-107 [96284]
    Other proteins in same PDB: d1q9la2, d1q9lb1, d1q9lb2, d1q9lc2, d1q9ld1, d1q9ld2
    part of Fab s25-2
    complexed with mg, zn

Details for d1q9lc1

PDB Entry: 1q9l (more details), 2.28 Å

PDB Description: S25-2 Fab Unliganded 2

SCOP Domain Sequences for d1q9lc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q9lc1 b.1.1.1 (C:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2}

SCOP Domain Coordinates for d1q9lc1:

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(The format of our PDB-style files is described here.)

Timeline for d1q9lc1: