SCOPe 2.08: Domain d1pgza2: 1pgz A:99-190

Lineage for d1pgza2 (1pgz A:99-190)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.7: RNA-binding domain, RBD, aka RNA recognition motif (RRM) [54928] (6 families)

5. Family d.58.7.1: Canonical RBD [54929] (70 proteins)
   Pfam PF00076
   Pfam PF13893

6. Protein Nuclear ribonucleoprotein A1 (RNP A1, UP1) [54930] (1 species)
   duplication: contains two domains of this fold

7. Species Human (Homo sapiens) [TaxId:9606] [54931] (14 PDB entries)
   Uniprot P09651 7-188

8. Domain d1pgza2: 1pgz A:99-190 [94698]
   protein/DNA complex; protein/RNA complex

Details for d1pgza2

PDB Entry: 1pgz, 2.6 Å

PDB Description: crystal structure of up1 complexed with d(ttagggttag(6-mi)g); a human telomeric repeat containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-mi)

PDB Compounds: (A:) heterogeneous nuclear ribonucleoprotein a1

SCOPe Domain Sequences for d1pgza2:

Sequence; same for both SEQRES and ATOM records:

>d1pgza2 d.58.7.1 (A:99-190) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
gahltvkkifvggikedteehhlrdyfeqygkievieimtdrgsgkkrgfafvtfddhds
vdkiviqkyhtvnghncevrkalskqemasas

Timeline for d1pgza2:

• d1pgza2 first appeared in SCOP 1.67
  
• d1pgza2 appears in SCOPe 2.07