SCOPe 2.07: Domain d1p9ra1: 1p9r A:100-498

Lineage for d1p9ra1 (1p9r A:100-498)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (21 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein Extracellular secretion NTPase EpsE [102375] (1 species)
   type II/IV secretion system protein; overall structure is similar to HP0525

7. Species Vibrio cholerae [TaxId:666] [102376] (2 PDB entries)

8. Domain d1p9ra1: 1p9r A:100-498 [94399]
   Other proteins in same PDB: d1p9ra2
   complexed with cl, zn

Details for d1p9ra1

PDB Entry: 1p9r, 2.5 Å

PDB Description: Crystal Structure of Vibrio cholerae putative NTPase EpsE

PDB Compounds: (A:) General secretion pathway protein E

SCOPe Domain Sequences for d1p9ra1:

Sequence, based on SEQRES records:

>d1p9ra1 c.37.1.11 (A:100-498) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
dffslaeelpqnedlleseddapiiklinamlgeaikegasdihietfektlsirfrvdg
vlrevlapsrklssllvsrvkvmakldiaekrvpqdgrislriggravdvrvstmpsshg
ervvmrlldknatrldlhslgmtahnhdnfrrlikrphgiilvtgptgsgksttlyaglq
elnsserniltvedpiefdidgigqtqvnprvdmtfarglrailrqdpdvvmvgeirdle
taqiavqasltghlvmstlhtntavgavtrlrdmgiepflisssllgvlaqrlvrtlcpd
ckepyeadkeqrklfdskkkeplilyratgcpkcnhkgyrgrtgihelllvddalqelih
seageqamekhirattpsirddgldkvrqgitsleevmr

Sequence, based on observed residues (ATOM records):

>d1p9ra1 c.37.1.11 (A:100-498) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
dffslaeeapiiklinamlgeaikegasdihietfektlsirfrvdgvlrevlapsrkls
sllvsrvkvmakldiaekrvpqdgrislavdvrvstmpsshgervvmrlldknatrldlh
slgmtahnhdnfrrlikrphgiilvtgptgsgksttlyaglqelnsserniltvedpief
didgigqtqvnprvdmtfarglrailrqdpdvvmvgeirdletaqiavqasltghlvmst
lhtntavgavtrlrdmgiepflisssllgvlaqrlvrtlcpdckepyeadkeqrklfepl
ilyratgcpkcnhkgyrgrtgihelllvddalqelihseageqamekhirattpsirddg
ldkvrqgitsleevmr

Timeline for d1p9ra1:

• d1p9ra1 first appeared in SCOP 1.67, called d1p9ra_
  
• d1p9ra1 appears in SCOPe 2.06
  
• d1p9ra1 appears in the current release, SCOPe 2.08