SCOP 1.71: Domain d1p2cd1: 1p2c D:901-1007

Lineage for d1p2cd1 (1p2c D:901-1007)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (170 PDB entries)

8. Domain d1p2cd1: 1p2c D:901-1007 [93920]
   Other proteins in same PDB: d1p2ca2, d1p2cb1, d1p2cb2, d1p2cc_, d1p2cd2, d1p2ce1, d1p2ce2, d1p2cf_
   part of anti-lysozyme Fab F10.6.6

Details for d1p2cd1

PDB Entry: 1p2c, 2 Å

PDB Description: crystal structure analysis of an anti-lysozyme antibody

SCOP Domain Sequences for d1p2cd1:

Sequence; same for both SEQRES and ATOM records:

>d1p2cd1 b.1.1.1 (D:901-1007) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldik

Timeline for d1p2cd1:

• d1p2cd1 first appeared in SCOP 1.67
  
• d1p2cd1 appears in SCOP 1.69
  
• d1p2cd1 appears in SCOP 1.73
  
• d1p2cd1 appears in the current release, SCOPe 2.08