Lineage for d1ot9a_ (1ot9 A:)

  1. Root: SCOP 1.67
  2. 405194Class d: Alpha and beta proteins (a+b) [53931] (260 folds)
  3. 417123Fold d.110: Profilin-like [55769] (7 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 417184Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (6 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. 417185Family d.110.3.1: PYP-like [55786] (2 proteins)
  6. 417186Protein Photoactive yellow protein, PYP [55787] (1 species)
  7. 417187Species Ectothiorhodospira halophila [TaxId:17] [55788] (24 PDB entries)
  8. 417191Domain d1ot9a_: 1ot9 A: [93510]
    complexed with hc4

Details for d1ot9a_

PDB Entry: 1ot9 (more details), 1 Å

PDB Description: cryotrapped state in wild type photoactive yellow protein, induced with continuous illumination at 110k

SCOP Domain Sequences for d1ot9a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ot9a_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Ectothiorhodospira halophila}
mehvafgsedientlakmddgqldglafgaiqldgdgnilqynaaegditgrdpkqvigk
nffkdvapctdspefygkfkegvasgnlntmfeytfdyqmtptkvkvhmkkalsgdsywv
fvkrv

SCOP Domain Coordinates for d1ot9a_:

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Timeline for d1ot9a_: