Lineage for d1odaa_ (1oda A:)

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 929299Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 929300Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 929301Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 931443Protein N-terminal domain of sialoadhesin [48732] (1 species)
  7. 931444Species Mouse (Mus musculus) [TaxId:10090] [48733] (6 PDB entries)
    Uniprot Q62230 20-130
  8. 931452Domain d1odaa_: 1oda A: [92781]
    complexed with bdu

Details for d1odaa_

PDB Entry: 1oda (more details), 3.31 Å

PDB Description: n-terminal of sialoadhesin in complex with me-a-9-n-(biphenyl-4-carbonyl)-amino-9-deoxy-neu5ac (bip compound)
PDB Compounds: (A:) sialoadhesin

SCOPe Domain Sequences for d1odaa_:

Sequence, based on SEQRES records: (download)

>d1odaa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus musculus) [TaxId: 10090]}
twgvsspknvqglsgscllipcifsypadvpvsngitaiwyydysgkrqvvihsgdpklv
dkrfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeisdsnrwldvkgttvtvttd

Sequence, based on observed residues (ATOM records): (download)

>d1odaa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus musculus) [TaxId: 10090]}
twgvsspknvqglsgscllipcifsypadvpvgitaiwyydysgkrqvvihsgdpklvdk
rfrgraelmgnmdhkvcnlllkdlkpedsgtynfrfeisdsnrwldvkgttvtvttd

SCOPe Domain Coordinates for d1odaa_:

Click to download the PDB-style file with coordinates for d1odaa_.
(The format of our PDB-style files is described here.)

Timeline for d1odaa_: