SCOP 1.69: Domain d1oarm_: 1oar M:

Lineage for d1oarm_ (1oar M:)

1. Root: SCOP 1.69

2. Class b: All beta proteins [48724] (144 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)

6. Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
   VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family

7. Species Rat (Rattus norvegicus) [TaxId:10116] [101504] (7 PDB entries)

8. Domain d1oarm_: 1oar M: [92714]
   Other proteins in same PDB: d1oarh_, d1oari_, d1oarj_, d1oark_

Details for d1oarm_

PDB Entry: 1oar, 2.22 Å

PDB Description: Fv IgE SPE-7 in complex with Alizarin Red

SCOP Domain Sequences for d1oarm_:

Sequence, based on SEQRES records:

>d1oarm_ b.1.1.1 (M:) Immunoglobulin light chain lambda variable domain, VL-lambda {Rat (Rattus norvegicus)}
vvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnnrapgvpa
rfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

Sequence, based on observed residues (ATOM records):

>d1oarm_ b.1.1.1 (M:) Immunoglobulin light chain lambda variable domain, VL-lambda {Rat (Rattus norvegicus)}
vvtqesalttspgetvtltcravttsnyanwvqekpdhlftgliggtnnrapgvparfsg
slignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

Timeline for d1oarm_:

• d1oarm_ first appeared in SCOP 1.67
  
• d1oarm_ appears in SCOP 1.71
  
• d1oarm_ appears in the current release, SCOPe 2.08