SCOPe 2.08: Domain d1o60b_: 1o60 B:

Lineage for d1o60b_ (1o60 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (5 species)

7. Species Haemophilus influenzae [TaxId:727] [102095] (1 PDB entry)

8. Domain d1o60b_: 1o60 B: [92533]
   structural genomics

Details for d1o60b_

PDB Entry: 1o60, 1.8 Å

PDB Description: crystal structure of kdo-8-phosphate synthase

PDB Compounds: (B:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d1o60b_:

Sequence, based on SEQRES records:

>d1o60b_ c.1.10.4 (B:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Haemophilus influenzae [TaxId: 727]}
qnkivkignidvandkpfvlfggmnvlesrdmamqvceayvkvteklgvpyvfkasfdka
nrssihsyrgpgmeeglkifqelkdtfgvkiitdvheiyqcqpvadvvdiiqlpaflarq
tdlveamaktgavinvkkpqflspsqmgnivekieecgndkiilcdrgtnfgydnlivdm
lgfsvmkkaskgspvifdvthslqcrdpfgaassgrraqvtelarsglavgiaglfleah
pnpnqakcdgpsalplsalegfvsqmkaiddlvksfpeldt

Sequence, based on observed residues (ATOM records):

>d1o60b_ c.1.10.4 (B:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Haemophilus influenzae [TaxId: 727]}
qnkivkignidvandkpfvlfggmnvlesrdmamqvceayvkvteklgvpyvfkasfdka
nrssihsyrgpgmeeglkifqelkdtfgvkiitdvheiyqcqpvadvvdiiqlpaflarq
tdlveamaktgavinvkkpqflspsqmgnivekieecgndkiilcdrgtnfgydnlivdm
lgfsvmkkaskgspvifdvthslqraqvtelarsglavgiaglfleahpnpnqakcdgps
alplsalegfvsqmkaiddlvksfpeldt

Timeline for d1o60b_:

• d1o60b_ first appeared in SCOP 1.67
  
• d1o60b_ appears in SCOPe 2.07