Lineage for d1niub2 (1niu B:12-244)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 681898Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 681899Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 681900Protein Alanine racemase [51421] (3 species)
  7. 681901Species Bacillus stearothermophilus [TaxId:1422] [51422] (8 PDB entries)
  8. 681915Domain d1niub2: 1niu B:12-244 [91896]
    Other proteins in same PDB: d1niua1, d1niub1
    complexed with scp

Details for d1niub2

PDB Entry: 1niu (more details), 2.2 Å

PDB Description: alanine racemase with bound inhibitor derived from l-cycloserine
PDB Compounds: (B:) alanine racemase

SCOP Domain Sequences for d1niub2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1niub2 c.1.6.1 (B:12-244) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]}
vdldaiydnvenlrrllpddthimavvkanayghgdvqvartaleagasrlavafldeal
alrekgieapilvlgasrpadaalaaqqrialtvfrsdwleeasalysgpfpihfhlkmd
tgmgrlgvkdeeetkrivalierhphfvleglythfatadevntdyfsyqytrflhmlew
lpsrpplvhcansaaslrfpdrtfnmvrfgiamyglapspgikpllpyplkea

SCOP Domain Coordinates for d1niub2:

Click to download the PDB-style file with coordinates for d1niub2.
(The format of our PDB-style files is described here.)

Timeline for d1niub2:

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Domains from same chain:
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d1niub1