SCOP 1.73: Domain d1naki2: 1nak I:114-229

Lineage for d1naki2 (1nak I:114-229)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)

6. Protein Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (5 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [88576] (330 PDB entries)

8. Domain d1naki2: 1nak I:114-229 [91756]
   Other proteins in same PDB: d1nakh1, d1naki1, d1nakl1, d1nakl2, d1nakm1, d1nakm2
   part of Fab 83.1 against HIV-1 gp120

Details for d1naki2

PDB Entry: 1nak, 2.57 Å

PDB Description: igg1 fab fragment (83.1) complex with 16-residue peptide (residues 304-321 of hiv-1 gp120 (mn isolate))

PDB Compounds: (I:) Fab 83.1 - heavy chain

SCOP Domain Sequences for d1naki2:

Sequence; same for both SEQRES and ATOM records:

>d1naki2 b.1.1.2 (I:114-229) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}
akttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd

Timeline for d1naki2:

• d1naki2 first appeared in SCOP 1.67
  
• d1naki2 appears in SCOP 1.71
  
• d1naki2 appears in SCOP 1.75
  
• d1naki2 appears in the current release, SCOPe 2.08